RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SOGA3Q5TF21 947 aa14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 MAP1SQ66K74 1059 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 STYK1Q6J9G0 422 aa14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
CTDNEP1-202ENST00000570380 A0A087WZG4 1122 aa14.33□□□□□ -0.12
CTDNEP1-202ENST00000570380 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
CTDNEP1-202ENST00000570380 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
CTDNEP1-202ENST00000570380 BCORQ6W2J9 1755 aa14.32□□□□□ -0.12
CTDNEP1-202ENST00000570380 MASTLQ96GX5 879 aa14.32□□□□□ -0.12
CTDNEP1-202ENST00000570380 ABT1Q9ULW3 272 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-202ENST00000570380 STARD3NLO95772 234 aa14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 IL13P35225 146 aa14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 RNF123Q5XPI4 1314 aa14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
CTDNEP1-202ENST00000570380 LTBP1Q14766 1721 aa14.3□□□□□ -0.12
CTDNEP1-202ENST00000570380 CCDC93Q567U6 631 aa14.3□□□□□ -0.12
CTDNEP1-202ENST00000570380 CAPNS2Q96L46 248 aa14.3□□□□□ -0.12
CTDNEP1-202ENST00000570380 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
CTDNEP1-202ENST00000570380 ZNF277Q9NRM2 450 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-202ENST00000570380 ST5P78524 1137 aa14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 FKBP4Q02790 459 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-202ENST00000570380 NPHP1O15259 732 aa14.28□□□□□ -0.12
CTDNEP1-202ENST00000570380 CYP4F22Q6NT55 531 aa14.28□□□□□ -0.12
CTDNEP1-202ENST00000570380 OLFM4Q6UX06 510 aa14.28□□□□□ -0.12
CTDNEP1-202ENST00000570380 GPR101Q96P66 508 aaPredicted RBP14.28□□□□□ -0.12
CTDNEP1-202ENST00000570380 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
CTDNEP1-202ENST00000570380 FZD9O00144 591 aa14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 CAMTA2O94983 1202 aa14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 ECE1P42892 770 aa14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 GRM1Q13255 1194 aa14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 MTHFSDQ2M296 383 aaKnown RBP14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
CTDNEP1-202ENST00000570380 HEG1Q9ULI3 1381 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 A1BGP04217 495 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 GPC2Q8N158 579 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 MCOLN1Q9GZU1 580 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 PANK3Q9H999 370 aa14.26□□□□□ -0.13
CTDNEP1-202ENST00000570380 HMOX1P09601 288 aa14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 NPR1P16066 1061 aa14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 IARSP41252 1262 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 CST9Q5W186 159 aa14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 RTKN2Q8IZC4 609 aa14.25□□□□□ -0.13
CTDNEP1-202ENST00000570380 COL4A5P29400 1685 aa14.24□□□□□ -0.13
CTDNEP1-202ENST00000570380 KLRG2A4D1S0 409 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-202ENST00000570380 AOC2O75106 756 aa14.24□□□□□ -0.13
CTDNEP1-202ENST00000570380 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
CTDNEP1-202ENST00000570380 TEX13AQ9BXU3 409 aaPredicted RBP14.24□□□□□ -0.13
CTDNEP1-202ENST00000570380 MAP2K2P36507 400 aa14.23□□□□□ -0.13
CTDNEP1-202ENST00000570380 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
CTDNEP1-202ENST00000570380 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-202ENST00000570380 TLL2Q9Y6L7 1015 aa14.23□□□□□ -0.13
CTDNEP1-202ENST00000570380 SNED1Q8TER0 1413 aa14.23□□□□□ -0.13
CTDNEP1-202ENST00000570380 TRAF5O00463 557 aa14.22□□□□□ -0.13
CTDNEP1-202ENST00000570380 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
CTDNEP1-202ENST00000570380 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
CTDNEP1-202ENST00000570380 EPS15P42566 896 aa14.21□□□□□ -0.13
CTDNEP1-202ENST00000570380 SCNN1DP51172 638 aa14.21□□□□□ -0.13
CTDNEP1-202ENST00000570380 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-202ENST00000570380 LMOD1P29536 600 aaPredicted RBP14.2□□□□□ -0.14
CTDNEP1-202ENST00000570380 DGKZQ13574 1117 aa14.2□□□□□ -0.14
CTDNEP1-202ENST00000570380 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
CTDNEP1-202ENST00000570380 JDP2Q8WYK2 163 aa14.2□□□□□ -0.14
CTDNEP1-202ENST00000570380 CA12O43570 354 aa14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 PIP4K2AP48426 406 aaPredicted RBP14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 EIF6P56537 245 aaKnown RBP14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 CLEC4GQ6UXB4 293 aa14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 PSMD1Q99460 953 aa14.19□□□□□ -0.14
CTDNEP1-202ENST00000570380 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
CTDNEP1-202ENST00000570380 TEFQ10587 303 aa14.18□□□□□ -0.14
CTDNEP1-202ENST00000570380 TPTE2Q6XPS3 522 aa14.18□□□□□ -0.14
CTDNEP1-202ENST00000570380 USP50Q70EL3 339 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-202ENST00000570380 SAPCD2Q86UD0 394 aa14.18□□□□□ -0.14
CTDNEP1-202ENST00000570380 KCNQ3O43525 872 aa14.17□□□□□ -0.14
CTDNEP1-202ENST00000570380 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
CTDNEP1-202ENST00000570380 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
CTDNEP1-202ENST00000570380 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
CTDNEP1-202ENST00000570380 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
CTDNEP1-202ENST00000570380 ZNF652Q9Y2D9 606 aa14.16□□□□□ -0.14
CTDNEP1-202ENST00000570380 NUP98P52948 1817 aa14.15□□□□□ -0.14
CTDNEP1-202ENST00000570380 CELF2O95319 508 aaKnown RBP14.15□□□□□ -0.14
CTDNEP1-202ENST00000570380 CIAPIN1Q6FI81 312 aa14.15□□□□□ -0.14
CTDNEP1-202ENST00000570380 HHIPL1Q96JK4 782 aa14.15□□□□□ -0.14
CTDNEP1-202ENST00000570380 PRAMEF22A3QJZ6 481 aa14.14□□□□□ -0.15
CTDNEP1-202ENST00000570380 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
CTDNEP1-202ENST00000570380 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
CTDNEP1-202ENST00000570380 ZIC5Q96T25 663 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms