RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 UTRNP46939 3433 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 RASSF7Q02833 373 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 NEUROD2Q15784 382 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 NBPF10Q6P3W6 841 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 NBPF15Q8N660 670 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 CNKSR1Q969H4 720 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 DLEC1Q9Y238 1755 aa11.73□□□□□ -0.53
NPLOC4-204ENST00000570324 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 C21orf2O43822 256 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 MYL6BP14649 208 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 HSPA6P17066 643 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 KDM3BQ7LBC6 1761 aa11.72□□□□□ -0.53
NPLOC4-204ENST00000570324 RGL2O15211 777 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 STYK1Q6J9G0 422 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 MASTLQ96GX5 879 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
NPLOC4-204ENST00000570324 SBF1O95248 1867 aa11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-204ENST00000570324 ERVV-1B6SEH8 477 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 SRGNP10124 158 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 NPR1P16066 1061 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 HLFQ16534 295 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 PRPF40BQ6NWY9 871 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 BABAM1Q9NWV8 329 aa11.69□□□□□ -0.54
NPLOC4-204ENST00000570324 CACNA1SQ13698 1873 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 ERBB4Q15303 1308 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 MAP3K15Q6ZN16 1313 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 NFKBIEO00221 500 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 ALDH1B1P30837 517 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 CCDC88AQ3V6T2 1871 aa11.68□□□□□ -0.54
NPLOC4-204ENST00000570324 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-204ENST00000570324 GLTPD2A6NH11 291 aa11.67□□□□□ -0.54
NPLOC4-204ENST00000570324 GPTP24298 496 aa11.67□□□□□ -0.54
NPLOC4-204ENST00000570324 APLP1P51693 650 aa11.67□□□□□ -0.54
NPLOC4-204ENST00000570324 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-204ENST00000570324 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 VEGFAP15692 232 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-204ENST00000570324 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 PRELPP51888 382 aa11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 FSTL1Q12841 308 aa11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 NUTM1Q86Y26 1132 aa11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 TIAM2Q8IVF5 1701 aa11.65□□□□□ -0.54
NPLOC4-204ENST00000570324 NUP98P52948 1817 aa11.65□□□□□ -0.55
NPLOC4-204ENST00000570324 SLX4Q8IY92 1834 aa11.65□□□□□ -0.55
NPLOC4-204ENST00000570324 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-204ENST00000570324 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 ANXA1P04083 346 aa11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 ARFGEF2Q9Y6D5 1785 aa11.63□□□□□ -0.55
NPLOC4-204ENST00000570324 CHL1O00533 1208 aa11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 CALD1Q05682 793 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 COPS6Q7L5N1 327 aa11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 ZNF34Q8IZ26 560 aa11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 DICER1Q9UPY3 1922 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-204ENST00000570324 UBN2Q6ZU65 1347 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 PDIA6Q15084 440 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 HDGFL1Q5TGJ6 251 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 XAGE3Q8WTP9 111 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
NPLOC4-204ENST00000570324 IBTKQ9P2D0 1353 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms