RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 USP50Q70EL3 339 aaPredicted RBP9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 CNKSR1Q969H4 720 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 BCORQ6W2J9 1755 aa9.49□□□□□ -0.89
HERPUD1-217ENST00000569429 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-217ENST00000569429 A0A1W2PP64 1363 aa9.48□□□□□ -0.89
HERPUD1-217ENST00000569429 TRPA1O75762 1119 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 FKBP4Q02790 459 aaKnown RBP eCLIP9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 RRS1Q15050 365 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 STYK1Q6J9G0 422 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 SLC12A5Q9H2X9 1139 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 TERF2IPQ9NYB0 399 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
HERPUD1-217ENST00000569429 FAM155AB1AL88 458 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-217ENST00000569429 CCDC93Q567U6 631 aa9.46□□□□□ -0.9
HERPUD1-217ENST00000569429 TMC1Q8TDI8 760 aa9.46□□□□□ -0.9
HERPUD1-217ENST00000569429 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-217ENST00000569429 KIF24Q5T7B8 1368 aa9.46□□□□□ -0.9
HERPUD1-217ENST00000569429 EPS15P42566 896 aa9.45□□□□□ -0.9
HERPUD1-217ENST00000569429 SCNN1DP51172 638 aa9.45□□□□□ -0.9
HERPUD1-217ENST00000569429 FBXO46Q6PJ61 603 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-217ENST00000569429 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
HERPUD1-217ENST00000569429 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-217ENST00000569429 SRGNP10124 158 aa9.44□□□□□ -0.9
HERPUD1-217ENST00000569429 KIF23Q02241 960 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-217ENST00000569429 MASTLQ96GX5 879 aa9.44□□□□□ -0.9
HERPUD1-217ENST00000569429 FLT4P35916 1363 aa9.44□□□□□ -0.9
HERPUD1-217ENST00000569429 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 COL15A1P39059 1388 aa9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 PTCD1O75127 700 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 IARSP41252 1262 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 HUNKP57058 714 aa9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 CCDC102AQ96A19 550 aa9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 GLIS2Q9BZE0 524 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
HERPUD1-217ENST00000569429 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 RGMBQ6NW40 437 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 RTKN2Q8IZC4 609 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 SYNE4Q8N205 404 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 GJA3Q9Y6H8 435 aa9.42□□□□□ -0.9
HERPUD1-217ENST00000569429 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 INTS3Q68E01 1043 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 CSRNP1Q96S65 589 aa9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 ADARB2Q9NS39 739 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-217ENST00000569429 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
HERPUD1-217ENST00000569429 CABP4P57796 275 aa9.4□□□□□ -0.9
HERPUD1-217ENST00000569429 CDC37L1Q7L3B6 337 aa9.4□□□□□ -0.9
HERPUD1-217ENST00000569429 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-217ENST00000569429 COL25A1Q9BXS0 654 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-217ENST00000569429 COL4A5P29400 1685 aa9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 PUS7Q96PZ0 661 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 PSMD1Q99460 953 aa9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
HERPUD1-217ENST00000569429 SLC10A3P09131 477 aa9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 CYP19A1P11511 503 aaPredicted RBP9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 EYA1Q99502 592 aa9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 SCN7AQ01118 1682 aa9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 SNED1Q8TER0 1413 aa9.38□□□□□ -0.91
HERPUD1-217ENST00000569429 ZNF157P51786 506 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-217ENST00000569429 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-217ENST00000569429 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
HERPUD1-217ENST00000569429 MUC3AQ02505 3323 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 H0YGN5 161 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 FYB1O15117 783 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 NPR1P16066 1061 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 ST5P78524 1137 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 CHRDL2Q6WN34 429 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 NCOR1O75376 2440 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
HERPUD1-217ENST00000569429 KIF20BQ96Q89 1820 aa9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 KLRG2A4D1S0 409 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 GPR25O00155 361 aa9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 EN2P19622 333 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 KCNA4P22459 653 aa9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 EIF5P55010 431 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 C2orf69Q8N8R5 385 aa9.35□□□□□ -0.91
HERPUD1-217ENST00000569429 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms