RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 PDE6BP35913 854 aa23.72■■□□□ 1.39
SIN3A-212ENST00000568919 TTLL7Q6ZT98 887 aa23.72■■□□□ 1.39
SIN3A-212ENST00000568919 CNBD1Q8NA66 436 aa23.72■■□□□ 1.39
SIN3A-212ENST00000568919 NIP7Q9Y221 180 aaKnown RBP eCLIP23.72■■□□□ 1.39
SIN3A-212ENST00000568919 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 ERVV-1B6SEH8 477 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 NPHP1O15259 732 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 ANP32CO43423 234 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 PDIA6Q15084 440 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 PDZRN3Q9UPQ7 1066 aa23.71■■□□□ 1.39
SIN3A-212ENST00000568919 ATP10DQ9P241 1426 aa23.7■■□□□ 1.38
SIN3A-212ENST00000568919 ADCY9O60503 1353 aa23.7■■□□□ 1.38
SIN3A-212ENST00000568919 MAP3K15Q6ZN16 1313 aa23.7■■□□□ 1.38
SIN3A-212ENST00000568919 ST5P78524 1137 aa23.7■■□□□ 1.38
SIN3A-212ENST00000568919 NBPF5PQ86XG9 351 aaPredicted RBP23.7■■□□□ 1.38
SIN3A-212ENST00000568919 ANKRD31Q8N7Z5 1873 aa23.7■■□□□ 1.38
SIN3A-212ENST00000568919 KRT24Q2M2I5 525 aa23.69■■□□□ 1.38
SIN3A-212ENST00000568919 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
SIN3A-212ENST00000568919 CFAP44Q96MT7 982 aa23.69■■□□□ 1.38
SIN3A-212ENST00000568919 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
SIN3A-212ENST00000568919 LRP10Q7Z4F1 713 aa23.68■■□□□ 1.38
SIN3A-212ENST00000568919 ZNF622Q969S3 477 aaKnown RBP eCLIP23.68■■□□□ 1.38
SIN3A-212ENST00000568919 FAM177BA6PVY3 158 aa23.67■■□□□ 1.38
SIN3A-212ENST00000568919 PROSER3Q2NL68 480 aa23.67■■□□□ 1.38
SIN3A-212ENST00000568919 NECTIN2Q92692 538 aa23.67■■□□□ 1.38
SIN3A-212ENST00000568919 DLEC1Q9Y238 1755 aa23.66■■□□□ 1.38
SIN3A-212ENST00000568919 ANXA1P04083 346 aa23.66■■□□□ 1.38
SIN3A-212ENST00000568919 ZBTB3Q9H5J0 574 aa23.66■■□□□ 1.38
SIN3A-212ENST00000568919 NUP98P52948 1817 aa23.66■■□□□ 1.38
SIN3A-212ENST00000568919 ZNF853P0CG23 659 aa23.65■■□□□ 1.38
SIN3A-212ENST00000568919 C9orf131Q5VYM1 1079 aa23.65■■□□□ 1.38
SIN3A-212ENST00000568919 ZNF526Q8TF50 670 aaPredicted RBP23.65■■□□□ 1.38
SIN3A-212ENST00000568919 MRS2Q9HD23 443 aa23.65■■□□□ 1.38
SIN3A-212ENST00000568919 SRGNP10124 158 aa23.64■■□□□ 1.37
SIN3A-212ENST00000568919 GPBP1L1Q9HC44 474 aaPredicted RBP23.64■■□□□ 1.37
SIN3A-212ENST00000568919 MBIPQ9NS73 344 aa23.64■■□□□ 1.37
SIN3A-212ENST00000568919 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
SIN3A-212ENST00000568919 CALD1Q05682 793 aaKnown RBP23.62■■□□□ 1.37
SIN3A-212ENST00000568919 STYK1Q6J9G0 422 aa23.62■■□□□ 1.37
SIN3A-212ENST00000568919 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
SIN3A-212ENST00000568919 ZNF34Q8IZ26 560 aa23.62■■□□□ 1.37
SIN3A-212ENST00000568919 MASTLQ96GX5 879 aa23.62■■□□□ 1.37
SIN3A-212ENST00000568919 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
SIN3A-212ENST00000568919 IFT57Q9NWB7 429 aa23.62■■□□□ 1.37
SIN3A-212ENST00000568919 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
SIN3A-212ENST00000568919 HOXB7P09629 217 aa23.61■■□□□ 1.37
SIN3A-212ENST00000568919 GPTP24298 496 aa23.61■■□□□ 1.37
SIN3A-212ENST00000568919 GTF2E1P29083 439 aaPredicted RBP23.61■■□□□ 1.37
SIN3A-212ENST00000568919 GNAI1P63096 354 aa23.61■■□□□ 1.37
SIN3A-212ENST00000568919 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
SIN3A-212ENST00000568919 C1QTNF8P60827 252 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 SUSD4Q5VX71 490 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 XAGE3Q8WTP9 111 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 NYXQ9GZU5 481 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 SBF1O95248 1867 aa23.6■■□□□ 1.37
SIN3A-212ENST00000568919 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
SIN3A-212ENST00000568919 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 C21orf2O43822 256 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
SIN3A-212ENST00000568919 HDGFL1Q5TGJ6 251 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 NUTM1Q86Y26 1132 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 RNF181Q9P0P0 153 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 ZNF219Q9P2Y4 722 aaPredicted RBP23.59■■□□□ 1.37
SIN3A-212ENST00000568919 UBN2Q6ZU65 1347 aa23.59■■□□□ 1.37
SIN3A-212ENST00000568919 RASSF7Q02833 373 aa23.58■■□□□ 1.37
SIN3A-212ENST00000568919 CHPF2Q9P2E5 772 aa23.58■■□□□ 1.37
SIN3A-212ENST00000568919 NPR1P16066 1061 aa23.57■■□□□ 1.36
SIN3A-212ENST00000568919 PRELPP51888 382 aa23.57■■□□□ 1.36
SIN3A-212ENST00000568919 ERFEQ4G0M1 354 aa23.57■■□□□ 1.36
SIN3A-212ENST00000568919 SLX4Q8IY92 1834 aa23.56■■□□□ 1.36
SIN3A-212ENST00000568919 CCDC27Q2M243 656 aa23.56■■□□□ 1.36
SIN3A-212ENST00000568919 PRPF40BQ6NWY9 871 aaKnown RBP23.56■■□□□ 1.36
SIN3A-212ENST00000568919 DBF4Q9UBU7 674 aaPredicted RBP23.56■■□□□ 1.36
SIN3A-212ENST00000568919 NFKBIEO00221 500 aa23.55■■□□□ 1.36
SIN3A-212ENST00000568919 ELL2O00472 640 aaPredicted RBP23.55■■□□□ 1.36
SIN3A-212ENST00000568919 LMNB1P20700 586 aa23.55■■□□□ 1.36
SIN3A-212ENST00000568919 PARP10Q53GL7 1025 aa23.54■■□□□ 1.36
SIN3A-212ENST00000568919 PPP1R42Q7Z4L9 355 aa23.54■■□□□ 1.36
SIN3A-212ENST00000568919 WWC1Q8IX03 1113 aa23.54■■□□□ 1.36
SIN3A-212ENST00000568919 C7orf43Q8WVR3 580 aa23.54■■□□□ 1.36
SIN3A-212ENST00000568919 NTSR2O95665 410 aa23.53■■□□□ 1.36
SIN3A-212ENST00000568919 TCIRG1Q13488 830 aa23.53■■□□□ 1.36
SIN3A-212ENST00000568919 C8orf58Q8NAV2 365 aa23.53■■□□□ 1.36
SIN3A-212ENST00000568919 ABCC12Q96J65 1359 aa23.52■■□□□ 1.36
SIN3A-212ENST00000568919 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
SIN3A-212ENST00000568919 KIF3CO14782 793 aa23.52■■□□□ 1.36
SIN3A-212ENST00000568919 NCBP3Q53F19 620 aaKnown RBP23.52■■□□□ 1.36
SIN3A-212ENST00000568919 HSP90AB3PQ58FF7 597 aa23.52■■□□□ 1.36
SIN3A-212ENST00000568919 HYPKQ9NX55 129 aa23.52■■□□□ 1.36
SIN3A-212ENST00000568919 CCDC88AQ3V6T2 1871 aa23.51■■□□□ 1.35
SIN3A-212ENST00000568919 ALDH1B1P30837 517 aa23.51■■□□□ 1.35
SIN3A-212ENST00000568919 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
SIN3A-212ENST00000568919 ANKRD13DQ6ZTN6 518 aa23.51■■□□□ 1.35
SIN3A-212ENST00000568919 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
SIN3A-212ENST00000568919 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
SIN3A-212ENST00000568919 SOGA3Q5TF21 947 aa23.5■■□□□ 1.35
SIN3A-212ENST00000568919 PLBD2Q8NHP8 589 aa23.5■■□□□ 1.35
SIN3A-212ENST00000568919 SLC10A5Q5PT55 438 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms