RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 COL5A2P05997 1499 aaPredicted RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 BRD2P25440 801 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 MKRN3Q13064 507 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 NSFL1CQ9UNZ2 370 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 GCP02774 474 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 ZNF853P0CG23 659 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 HSP90B1P14625 803 aaKnown RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 U2AF1Q01081 240 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC01541-202ENST00000568095 TAF3Q5VWG9 929 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 AEBP1Q8IUX7 1158 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 KCNH5Q8NCM2 988 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
LINC01541-202ENST00000568095 SYCE3A1L190 88 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 CTIFO43310 598 aaKnown RBP6.62□□□□□ -1.35
LINC01541-202ENST00000568095 PSME1Q06323 249 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 EYA1Q99502 592 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 CHMP4BQ9H444 224 aaKnown RBP6.62□□□□□ -1.35
LINC01541-202ENST00000568095 ABCC4O15439 1325 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 C5P01031 1676 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 PRKAR2BP31323 418 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 NOLC1Q14978 699 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01541-202ENST00000568095 NFE2L2Q16236 605 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
LINC01541-202ENST00000568095 ARHGEF1Q92888 912 aaKnown RBP6.62□□□□□ -1.35
LINC01541-202ENST00000568095 LAMB4A4D0S4 1761 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 MEGF6O75095 1541 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 AXIN2Q9Y2T1 843 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 CEMIPQ8WUJ3 1361 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 CICQ96RK0 1608 aaPredicted RBP6.61□□□□□ -1.35
LINC01541-202ENST00000568095 BRD1O95696 1058 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TTC22Q5TAA0 569 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 ANKRD45Q5TZF3 282 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 FAM184AQ8NB25 1140 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TRAIPQ9BWF2 469 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TSPY26PQ9H489 355 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 ERBB3P21860 1342 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 LRP6O75581 1613 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
LINC01541-202ENST00000568095 CUL4AQ13619 759 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 POLA2Q14181 598 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 SYCP1Q15431 976 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 ZGPATQ8N5A5 531 aaKnown RBP6.61□□□□□ -1.35
LINC01541-202ENST00000568095 BCL2L12Q9HB09 334 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TMEM51Q9NW97 253 aa6.61□□□□□ -1.35
LINC01541-202ENST00000568095 TMEM87AQ8NBN3 555 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
LINC01541-202ENST00000568095 AK7Q96M32 723 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 FEZ1Q99689 392 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 KIF3AQ9Y496 699 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 DISP2A7MBM2 1401 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 BARGINQ6ZT62 677 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 MRPL50Q8N5N7 158 aaKnown RBP6.6□□□□□ -1.35
LINC01541-202ENST00000568095 ITGB4P16144 1822 aa6.6□□□□□ -1.35
LINC01541-202ENST00000568095 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
LINC01541-202ENST00000568095 HMOX1P09601 288 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 CBX1P83916 185 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 FLIIQ13045 1269 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 KDM4CQ9H3R0 1056 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 DCTPP1Q9H773 170 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 KIAA0232Q92628 1395 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 SEMA3EO15041 775 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 ST18O60284 1047 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 MTMR7Q9Y216 660 aa6.59□□□□□ -1.35
LINC01541-202ENST00000568095 ATP10DQ9P241 1426 aa6.59□□□□□ -1.36
LINC01541-202ENST00000568095 TMCO4Q5TGY1 634 aa6.59□□□□□ -1.36
LINC01541-202ENST00000568095 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.36
LINC01541-202ENST00000568095 INTS3Q68E01 1043 aaKnown RBP6.59□□□□□ -1.36
LINC01541-202ENST00000568095 SULT6B1Q6IMI4 303 aa6.59□□□□□ -1.36
LINC01541-202ENST00000568095 INTS4Q96HW7 963 aaKnown RBP6.59□□□□□ -1.36
LINC01541-202ENST00000568095 NBPF4Q96M43 638 aa6.59□□□□□ -1.36
LINC01541-202ENST00000568095 KIAA1524Q8TCG1 905 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 TSC1Q92574 1164 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 STK24Q9Y6E0 443 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 THSD7AQ9UPZ6 1657 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 VAMP4O75379 141 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 PHF14O94880 888 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
LINC01541-202ENST00000568095 SYAP1Q96A49 352 aaPredicted RBP6.58□□□□□ -1.36
LINC01541-202ENST00000568095 FUCA2Q9BTY2 467 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
LINC01541-202ENST00000568095 RPAP1Q9BWH6 1393 aaPredicted RBP6.58□□□□□ -1.36
LINC01541-202ENST00000568095 RGS12O14924 1447 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 KDM6AO15550 1401 aaPredicted RBP6.57□□□□□ -1.36
LINC01541-202ENST00000568095 SLIT2O94813 1529 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 MCM2P49736 904 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 MTHFSDQ2M296 383 aaKnown RBP6.57□□□□□ -1.36
LINC01541-202ENST00000568095 PDCL2Q8N4E4 241 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 IFT57Q9NWB7 429 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 OGFRQ9NZT2 677 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 HTATSF1O43719 755 aaKnown RBP6.57□□□□□ -1.36
LINC01541-202ENST00000568095 AMPHP49418 695 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 SLC20A2Q08357 652 aa6.57□□□□□ -1.36
LINC01541-202ENST00000568095 RREB1Q92766 1687 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms