RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 PDE6BP35913 854 aa24.8■■□□□ 1.56
CPNE7-208ENST00000566398 KIF6Q6ZMV9 814 aa24.8■■□□□ 1.56
CPNE7-208ENST00000566398 NBPF5PQ86XG9 351 aaPredicted RBP24.8■■□□□ 1.56
CPNE7-208ENST00000566398 CCDC184Q52MB2 194 aa24.79■■□□□ 1.56
CPNE7-208ENST00000566398 CCDC24Q8N4L8 307 aa24.79■■□□□ 1.56
CPNE7-208ENST00000566398 PDZRN3Q9UPQ7 1066 aa24.79■■□□□ 1.56
CPNE7-208ENST00000566398 NIP7Q9Y221 180 aaKnown RBP eCLIP24.79■■□□□ 1.56
CPNE7-208ENST00000566398 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
CPNE7-208ENST00000566398 EIF2S2P20042 333 aaKnown RBP24.78■■□□□ 1.56
CPNE7-208ENST00000566398 MAP3K15Q6ZN16 1313 aa24.78■■□□□ 1.56
CPNE7-208ENST00000566398 ERVV-1B6SEH8 477 aa24.77■■□□□ 1.56
CPNE7-208ENST00000566398 HLFQ16534 295 aa24.77■■□□□ 1.56
CPNE7-208ENST00000566398 TTLL7Q6ZT98 887 aa24.77■■□□□ 1.56
CPNE7-208ENST00000566398 BRCA1P38398 1863 aaKnown RBP24.77■■□□□ 1.56
CPNE7-208ENST00000566398 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
CPNE7-208ENST00000566398 TTLL6Q8N841 843 aa24.76■■□□□ 1.55
CPNE7-208ENST00000566398 MRS2Q9HD23 443 aa24.76■■□□□ 1.55
CPNE7-208ENST00000566398 CFAP44Q96MT7 982 aa24.75■■□□□ 1.55
CPNE7-208ENST00000566398 KRT24Q2M2I5 525 aa24.74■■□□□ 1.55
CPNE7-208ENST00000566398 TPTE2Q6XPS3 522 aa24.74■■□□□ 1.55
CPNE7-208ENST00000566398 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
CPNE7-208ENST00000566398 ZNF622Q969S3 477 aaKnown RBP eCLIP24.73■■□□□ 1.55
CPNE7-208ENST00000566398 FAM177BA6PVY3 158 aa24.72■■□□□ 1.55
CPNE7-208ENST00000566398 PDIA6Q15084 440 aa24.72■■□□□ 1.55
CPNE7-208ENST00000566398 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
CPNE7-208ENST00000566398 HOXB7P09629 217 aa24.71■■□□□ 1.55
CPNE7-208ENST00000566398 PROSER3Q2NL68 480 aa24.71■■□□□ 1.55
CPNE7-208ENST00000566398 LRP10Q7Z4F1 713 aa24.71■■□□□ 1.55
CPNE7-208ENST00000566398 ZNF526Q8TF50 670 aaPredicted RBP24.71■■□□□ 1.55
CPNE7-208ENST00000566398 GPBP1L1Q9HC44 474 aaPredicted RBP24.71■■□□□ 1.55
CPNE7-208ENST00000566398 MBIPQ9NS73 344 aa24.71■■□□□ 1.55
CPNE7-208ENST00000566398 IFT57Q9NWB7 429 aa24.71■■□□□ 1.55
CPNE7-208ENST00000566398 ANXA1P04083 346 aa24.7■■□□□ 1.54
CPNE7-208ENST00000566398 GTF2E1P29083 439 aaPredicted RBP24.7■■□□□ 1.54
CPNE7-208ENST00000566398 C9orf131Q5VYM1 1079 aa24.7■■□□□ 1.54
CPNE7-208ENST00000566398 GNAI1P63096 354 aa24.69■■□□□ 1.54
CPNE7-208ENST00000566398 HDGFL1Q5TGJ6 251 aa24.69■■□□□ 1.54
CPNE7-208ENST00000566398 NYXQ9GZU5 481 aa24.69■■□□□ 1.54
CPNE7-208ENST00000566398 ARFGEF1Q9Y6D6 1849 aa24.69■■□□□ 1.54
CPNE7-208ENST00000566398 DLEC1Q9Y238 1755 aa24.68■■□□□ 1.54
CPNE7-208ENST00000566398 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
CPNE7-208ENST00000566398 SRGNP10124 158 aa24.68■■□□□ 1.54
CPNE7-208ENST00000566398 STYK1Q6J9G0 422 aa24.68■■□□□ 1.54
CPNE7-208ENST00000566398 MASTLQ96GX5 879 aa24.68■■□□□ 1.54
CPNE7-208ENST00000566398 DDX21Q9NR30 783 aaKnown RBP eCLIP24.68■■□□□ 1.54
CPNE7-208ENST00000566398 ANKRD31Q8N7Z5 1873 aa24.67■■□□□ 1.54
CPNE7-208ENST00000566398 GPTP24298 496 aa24.67■■□□□ 1.54
CPNE7-208ENST00000566398 GIGYF2Q6Y7W6 1299 aaKnown RBP24.67■■□□□ 1.54
CPNE7-208ENST00000566398 CNKSR1Q969H4 720 aa24.67■■□□□ 1.54
CPNE7-208ENST00000566398 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
CPNE7-208ENST00000566398 UBN2Q6ZU65 1347 aa24.66■■□□□ 1.54
CPNE7-208ENST00000566398 DUSP27Q5VZP5 1158 aa24.66■■□□□ 1.54
CPNE7-208ENST00000566398 RNF181Q9P0P0 153 aa24.66■■□□□ 1.54
CPNE7-208ENST00000566398 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
CPNE7-208ENST00000566398 COL11A2P13942 1736 aaPredicted RBP24.65■■□□□ 1.54
CPNE7-208ENST00000566398 RASSF7Q02833 373 aa24.65■■□□□ 1.54
CPNE7-208ENST00000566398 COPS6Q7L5N1 327 aa24.65■■□□□ 1.54
CPNE7-208ENST00000566398 XAGE3Q8WTP9 111 aa24.65■■□□□ 1.54
CPNE7-208ENST00000566398 KLRG2A4D1S0 409 aaPredicted RBP24.64■■□□□ 1.54
CPNE7-208ENST00000566398 AIMP1Q12904 312 aaKnown RBP24.64■■□□□ 1.54
CPNE7-208ENST00000566398 PRPF40BQ6NWY9 871 aaKnown RBP24.64■■□□□ 1.54
CPNE7-208ENST00000566398 ZNF34Q8IZ26 560 aa24.64■■□□□ 1.54
CPNE7-208ENST00000566398 DBF4Q9UBU7 674 aaPredicted RBP24.64■■□□□ 1.54
CPNE7-208ENST00000566398 ABCC12Q96J65 1359 aa24.64■■□□□ 1.53
CPNE7-208ENST00000566398 C21orf2O43822 256 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 NPR1P16066 1061 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 C1QTNF8P60827 252 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 CCDC27Q2M243 656 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
CPNE7-208ENST00000566398 ZNF219Q9P2Y4 722 aaPredicted RBP24.63■■□□□ 1.53
CPNE7-208ENST00000566398 SUSD4Q5VX71 490 aa24.62■■□□□ 1.53
CPNE7-208ENST00000566398 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
CPNE7-208ENST00000566398 NFKBIEO00221 500 aa24.61■■□□□ 1.53
CPNE7-208ENST00000566398 LMNB1P20700 586 aa24.61■■□□□ 1.53
CPNE7-208ENST00000566398 ERFEQ4G0M1 354 aa24.61■■□□□ 1.53
CPNE7-208ENST00000566398 HSP90AB3PQ58FF7 597 aa24.61■■□□□ 1.53
CPNE7-208ENST00000566398 NTSR2O95665 410 aa24.6■■□□□ 1.53
CPNE7-208ENST00000566398 SOGA3Q5TF21 947 aa24.6■■□□□ 1.53
CPNE7-208ENST00000566398 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
CPNE7-208ENST00000566398 WWC1Q8IX03 1113 aa24.6■■□□□ 1.53
CPNE7-208ENST00000566398 RIC1Q4ADV7 1423 aa24.6■■□□□ 1.53
CPNE7-208ENST00000566398 HYPKQ9NX55 129 aa24.59■■□□□ 1.53
CPNE7-208ENST00000566398 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
CPNE7-208ENST00000566398 ZC3H4Q9UPT8 1303 aaKnown RBP24.58■■□□□ 1.52
CPNE7-208ENST00000566398 ELL2O00472 640 aaPredicted RBP24.57■■□□□ 1.52
CPNE7-208ENST00000566398 CRY2Q49AN0 593 aa24.57■■□□□ 1.52
CPNE7-208ENST00000566398 UTP14AQ9BVJ6 771 aaKnown RBP24.57■■□□□ 1.52
CPNE7-208ENST00000566398 C8orf58Q8NAV2 365 aa24.56■■□□□ 1.52
CPNE7-208ENST00000566398 PLBD2Q8NHP8 589 aa24.56■■□□□ 1.52
CPNE7-208ENST00000566398 TAOK3Q9H2K8 898 aa24.56■■□□□ 1.52
CPNE7-208ENST00000566398 RNF123Q5XPI4 1314 aa24.56■■□□□ 1.52
CPNE7-208ENST00000566398 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 PRELPP51888 382 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 TCIRG1Q13488 830 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 RPGRQ92834 1020 aaKnown RBP24.55■■□□□ 1.52
CPNE7-208ENST00000566398 TSR2Q969E8 191 aaKnown RBP24.55■■□□□ 1.52
CPNE7-208ENST00000566398 CHMP4AQ9BY43 222 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 NUP98P52948 1817 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 IL16Q14005 1332 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms