RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
CMTM3-212ENST00000566121 SOGA3Q5TF21 947 aa20■□□□□ 0.79
CMTM3-212ENST00000566121 MASTLQ96GX5 879 aa20■□□□□ 0.79
CMTM3-212ENST00000566121 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
CMTM3-212ENST00000566121 RNF181Q9P0P0 153 aa20■□□□□ 0.79
CMTM3-212ENST00000566121 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
CMTM3-212ENST00000566121 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
CMTM3-212ENST00000566121 RBM46Q8TBY0 533 aaKnown RBP19.99■□□□□ 0.79
CMTM3-212ENST00000566121 ZNF526Q8TF50 670 aaPredicted RBP19.99■□□□□ 0.79
CMTM3-212ENST00000566121 ANKRD31Q8N7Z5 1873 aa19.99■□□□□ 0.79
CMTM3-212ENST00000566121 RIPK4P57078 832 aa19.98■□□□□ 0.79
CMTM3-212ENST00000566121 NBPF5PQ86XG9 351 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-212ENST00000566121 NFKBIEO00221 500 aa19.97■□□□□ 0.79
CMTM3-212ENST00000566121 C7orf43Q8WVR3 580 aa19.97■□□□□ 0.79
CMTM3-212ENST00000566121 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
CMTM3-212ENST00000566121 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.79
CMTM3-212ENST00000566121 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 GLTPD2A6NH11 291 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 NPR1P16066 1061 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
CMTM3-212ENST00000566121 PRELPP51888 382 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 FSTL1Q12841 308 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 ZNF622Q969S3 477 aaKnown RBP eCLIP19.95■□□□□ 0.78
CMTM3-212ENST00000566121 NYXQ9GZU5 481 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 NMRK2Q9NPI5 230 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
CMTM3-212ENST00000566121 RIC1Q4ADV7 1423 aa19.94■□□□□ 0.78
CMTM3-212ENST00000566121 HLFQ16534 295 aa19.94■□□□□ 0.78
CMTM3-212ENST00000566121 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
CMTM3-212ENST00000566121 RUNDC1Q96C34 613 aa19.94■□□□□ 0.78
CMTM3-212ENST00000566121 PRKRIP1Q9H875 184 aaPredicted RBP19.94■□□□□ 0.78
CMTM3-212ENST00000566121 TSPYL4Q9UJ04 414 aa19.94■□□□□ 0.78
CMTM3-212ENST00000566121 CHL1O00533 1208 aa19.93■□□□□ 0.78
CMTM3-212ENST00000566121 THUMPD2Q9BTF0 503 aaKnown RBP19.93■□□□□ 0.78
CMTM3-212ENST00000566121 NPHP1O15259 732 aa19.92■□□□□ 0.78
CMTM3-212ENST00000566121 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
CMTM3-212ENST00000566121 APLP1P51693 650 aa19.92■□□□□ 0.78
CMTM3-212ENST00000566121 CRY2Q49AN0 593 aa19.92■□□□□ 0.78
CMTM3-212ENST00000566121 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
CMTM3-212ENST00000566121 FER1L6Q2WGJ9 1857 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 C21orf2O43822 256 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 RASSF7Q02833 373 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 PDIA6Q15084 440 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
CMTM3-212ENST00000566121 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 ZNF34Q8IZ26 560 aa19.91■□□□□ 0.78
CMTM3-212ENST00000566121 HOXB7P09629 217 aa19.9■□□□□ 0.78
CMTM3-212ENST00000566121 VEGFAP15692 232 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-212ENST00000566121 HOXA10P31260 410 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-212ENST00000566121 TAOK3Q9H2K8 898 aa19.9■□□□□ 0.78
CMTM3-212ENST00000566121 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
CMTM3-212ENST00000566121 COL11A2P13942 1736 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-212ENST00000566121 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
CMTM3-212ENST00000566121 GRIPAP1Q4V328 841 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 DPY19L2Q6NUT2 758 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 TTLL7Q6ZT98 887 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 ARFGEF2Q9Y6D5 1785 aa19.89■□□□□ 0.77
CMTM3-212ENST00000566121 TNRC6CQ9HCJ0 1690 aaKnown RBP19.88■□□□□ 0.77
CMTM3-212ENST00000566121 RNF123Q5XPI4 1314 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 PARP10Q53GL7 1025 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 C16orf71Q8IYS4 520 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-212ENST00000566121 RTKN2Q8IZC4 609 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 RRAGCQ9HB90 399 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 SLX4Q8IY92 1834 aa19.88■□□□□ 0.77
CMTM3-212ENST00000566121 DICER1Q9UPY3 1922 aaKnown RBP19.87■□□□□ 0.77
CMTM3-212ENST00000566121 CCDC93Q567U6 631 aa19.87■□□□□ 0.77
CMTM3-212ENST00000566121 SLC10A5Q5PT55 438 aa19.87■□□□□ 0.77
CMTM3-212ENST00000566121 NUP98P52948 1817 aa19.86■□□□□ 0.77
CMTM3-212ENST00000566121 MYL6BP14649 208 aa19.85■□□□□ 0.77
CMTM3-212ENST00000566121 GTF2E1P29083 439 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-212ENST00000566121 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
CMTM3-212ENST00000566121 PPP1R42Q7Z4L9 355 aa19.85■□□□□ 0.77
CMTM3-212ENST00000566121 DNAJC5GQ8N7S2 189 aa19.85■□□□□ 0.77
CMTM3-212ENST00000566121 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
CMTM3-212ENST00000566121 DDX21Q9NR30 783 aaKnown RBP eCLIP19.85■□□□□ 0.77
CMTM3-212ENST00000566121 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
CMTM3-212ENST00000566121 HSP90AB3PQ58FF7 597 aa19.84■□□□□ 0.77
CMTM3-212ENST00000566121 SMC1BQ8NDV3 1235 aa19.84■□□□□ 0.77
CMTM3-212ENST00000566121 CRAMP1Q96RY5 1269 aa19.84■□□□□ 0.77
CMTM3-212ENST00000566121 UBN2Q6ZU65 1347 aa19.83■□□□□ 0.77
CMTM3-212ENST00000566121 POTECB2RU33 542 aa19.83■□□□□ 0.77
CMTM3-212ENST00000566121 NTSR2O95665 410 aa19.83■□□□□ 0.77
CMTM3-212ENST00000566121 ZNF853P0CG23 659 aa19.83■□□□□ 0.77
CMTM3-212ENST00000566121 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-212ENST00000566121 PSMD1Q99460 953 aa19.83■□□□□ 0.77
CMTM3-212ENST00000566121 WDR90Q96KV7 1748 aa19.82■□□□□ 0.76
CMTM3-212ENST00000566121 CCDC88AQ3V6T2 1871 aa19.82■□□□□ 0.76
CMTM3-212ENST00000566121 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
CMTM3-212ENST00000566121 SUSD4Q5VX71 490 aa19.82■□□□□ 0.76
CMTM3-212ENST00000566121 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
CMTM3-212ENST00000566121 SNED1Q8TER0 1413 aa19.82■□□□□ 0.76
CMTM3-212ENST00000566121 EIF2S2P20042 333 aaKnown RBP19.81■□□□□ 0.76
CMTM3-212ENST00000566121 CALD1Q05682 793 aaKnown RBP19.81■□□□□ 0.76
CMTM3-212ENST00000566121 L3MBTL3Q96JM7 780 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-212ENST00000566121 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
CMTM3-212ENST00000566121 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms