RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TSPY10P0CW01 314 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 MCCP23508 829 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 GYS2P54840 703 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 SGSM2O43147 1006 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 SEC31AO94979 1220 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 RDXP35241 583 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 TDO2P48775 406 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 OTUD7AQ8TE49 926 aaPredicted RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 TACO1Q9BSH4 297 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 TOMM22Q9NS69 142 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 CWC15Q9P013 229 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 TRIM21P19474 475 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 C10orf67Q8IYJ2 551 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 MRPL50Q8N5N7 158 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 GOLGA5Q8TBA6 731 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 PALD1Q9ULE6 856 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 NUP153P49790 1475 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 EIF2AK4Q9P2K8 1649 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 SPAG9O60271 1321 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 IRF6O14896 467 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 ANAPC15P60006 121 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 LRRN4CLQ8ND94 238 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 STAG1Q8WVM7 1258 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 AMOTL2Q9Y2J4 779 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 RGS12O14924 1447 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 ABCC4O15439 1325 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 KIF3CO14782 793 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 C21orf2O43822 256 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 SASH3O75995 380 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 OAS2P29728 719 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 NBPF9Q3BBW0 867 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 DCTPP1Q9H773 170 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 TADA3O75528 432 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 GIMAP7Q8NHV1 300 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 CCDC97Q96F63 343 aaPredicted RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 INHBEP58166 350 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 DYDC1Q8WWB3 177 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 DNMT1P26358 1616 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 CACNA1FO60840 1977 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 ZBTB7BO15156 539 aaPredicted RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 IPO8O15397 1037 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 TSR1Q2NL82 804 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 MAP9Q49MG5 647 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 MSL3Q8N5Y2 521 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 INO80Q9ULG1 1556 aaPredicted RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 PTCH1Q13635 1447 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 U2SURPO15042 1029 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 CEP89Q96ST8 783 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 MORC1Q86VD1 984 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 SPC24Q8NBT2 197 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 TSR2Q969E8 191 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 NOB1Q9ULX3 412 aaKnown RBP3.41□□□□□ -1.86
CHD9-218ENST00000566029 SUFUQ9UMX1 484 aa3.41□□□□□ -1.86
CHD9-218ENST00000566029 MCM2P49736 904 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 NBPF10Q6P3W6 841 aaKnown RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 NFXL1Q6ZNB6 911 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 TTC16Q8NEE8 873 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 ZSCAN22P10073 491 aaPredicted RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 CBX8Q9HC52 389 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 GPATCH8Q9UKJ3 1502 aaKnown RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 GOLGA6L4A6NEF3 574 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 HTATSF1O43719 755 aaKnown RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 VIMP08670 466 aaKnown RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 ANKRD45Q5TZF3 282 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 CCDC69A6NI79 296 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 C16orf45Q96MC5 204 aaPredicted RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 KRBA2Q6ZNG9 492 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 PRAM1Q96QH2 718 aa3.4□□□□□ -1.86
CHD9-218ENST00000566029 CPSF2Q9P2I0 782 aaKnown RBP3.4□□□□□ -1.86
CHD9-218ENST00000566029 TMCO5BA8MYB1 307 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 ST18O60284 1047 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CC2D1AQ6P1N0 951 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 RSRC2Q7L4I2 434 aaKnown RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 OSBPL5Q9H0X9 879 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 WDHD1O75717 1129 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 UBE2HP62256 183 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 TYRO3Q06418 890 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 PDE1CQ14123 709 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 ARID5BQ14865 1188 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 ERCC6LQ2NKX8 1250 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 ALDH1L2Q3SY69 923 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 A1CFQ9NQ94 594 aaKnown RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 TRIM35Q9UPQ4 493 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 ZNF853P0CG23 659 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 GRIK3Q13003 919 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 GIMAP6Q6P9H5 292 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CCDC91Q7Z6B0 441 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 FUT8Q9BYC5 575 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 DEF6Q9H4E7 631 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 GDPD2Q9HCC8 539 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 DDX19AQ9NUU7 478 aaKnown RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 KLHL33A6NCF5 533 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 WASLO00401 505 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 KCNA4P22459 653 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 TTC6Q86TZ1 520 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CAGE1Q8TC20 777 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 KAT2BQ92831 832 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CD109Q6YHK3 1445 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 MAP2K7O14733 419 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 MNS1Q8NEH6 495 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms