RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
CHD9-217ENST00000565832 OXER1Q8TDS5 423 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 SLC39A7Q92504 469 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 STK31Q9BXU1 1019 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 SLC52A2Q9HAB3 445 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 CHPF2Q9P2E5 772 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 LRRC37A3O60309 1634 aa7.87□□□□□ -1.15
CHD9-217ENST00000565832 EP400Q96L91 3159 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 GPR37O15354 613 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 GIGYF1O75420 1035 aaPredicted RBP7.86□□□□□ -1.15
CHD9-217ENST00000565832 PIP4K2AP48426 406 aaPredicted RBP7.86□□□□□ -1.15
CHD9-217ENST00000565832 FLIIQ13045 1269 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 FKBP5Q13451 457 aaPredicted RBP7.86□□□□□ -1.15
CHD9-217ENST00000565832 CARD10Q9BWT7 1032 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 API5Q9BZZ5 524 aaKnown RBP7.86□□□□□ -1.15
CHD9-217ENST00000565832 RWDD1Q9H446 243 aaPredicted RBP7.86□□□□□ -1.15
CHD9-217ENST00000565832 ABCA3Q99758 1704 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 TOM1O60784 492 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 IL2RBP14784 551 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 ZNF790Q6PG37 636 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 MEIS3Q99687 375 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 BABAM1Q9NWV8 329 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 PDZRN3Q9UPQ7 1066 aa7.86□□□□□ -1.15
CHD9-217ENST00000565832 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
CHD9-217ENST00000565832 DDX12PQ92771 950 aa7.85□□□□□ -1.15
CHD9-217ENST00000565832 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
CHD9-217ENST00000565832 DCAF5Q96JK2 942 aa7.85□□□□□ -1.15
CHD9-217ENST00000565832 C7P10643 843 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 GPBP1L1Q9HC44 474 aaPredicted RBP7.84□□□□□ -1.15
CHD9-217ENST00000565832 METRNQ9UJH8 293 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 USP16Q9Y5T5 823 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 PTPRCP08575 1304 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 OSBPP22059 807 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 CABP4P57796 275 aa7.84□□□□□ -1.15
CHD9-217ENST00000565832 PI4KAP2A4QPH2 592 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 MYL6BP14649 208 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 AIMP1Q12904 312 aaKnown RBP7.83□□□□□ -1.16
CHD9-217ENST00000565832 HDAC1Q13547 482 aaPredicted RBP7.83□□□□□ -1.16
CHD9-217ENST00000565832 AAMPQ13685 434 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 PI4KAP1Q8N8J0 262 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 OVOS2A0A0G2JMS6 1433 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 KDM3BQ7LBC6 1761 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 SCN11AQ9UI33 1791 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 HEG1Q9ULI3 1381 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
CHD9-217ENST00000565832 POTEIP0CG38 1075 aa7.83□□□□□ -1.16
CHD9-217ENST00000565832 PHLPP1O60346 1717 aa7.82□□□□□ -1.16
CHD9-217ENST00000565832 C3orf67Q6ZVT6 689 aa7.82□□□□□ -1.16
CHD9-217ENST00000565832 BACH2Q9BYV9 841 aa7.82□□□□□ -1.16
CHD9-217ENST00000565832 SIPA1L3O60292 1781 aaPredicted RBP7.82□□□□□ -1.16
CHD9-217ENST00000565832 APBB1O00213 710 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 TRIM66O15016 1216 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 EVI5O60447 810 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 PTGER2P43116 358 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 USP44Q9H0E7 712 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
CHD9-217ENST00000565832 TBC1D12O60347 775 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 ANKRD45Q5TZF3 282 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 SMC5Q8IY18 1101 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 TTC5Q8N0Z6 440 aa7.81□□□□□ -1.16
CHD9-217ENST00000565832 DBF4Q9UBU7 674 aaPredicted RBP7.81□□□□□ -1.16
CHD9-217ENST00000565832 CACNA1FO60840 1977 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 ABCC6O95255 1503 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 HSP90AB1P08238 724 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 HOXB7P09629 217 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 NBPF7P0C2Y1 421 aaPredicted RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 C8orf34Q49A92 452 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 CEP85Q6P2H3 762 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 NPM2Q86SE8 214 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 ASAP1Q9ULH1 1129 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 CCDC9Q9Y3X0 531 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 ADAMTS7Q9UKP4 1686 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 PKD1L3Q7Z443 1732 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 PRIM1P49642 420 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 CCT4P50991 539 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 CWF19L2Q2TBE0 894 aaKnown RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 PIGBQ92521 554 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
CHD9-217ENST00000565832 MAP3K2Q9Y2U5 619 aa7.8□□□□□ -1.16
CHD9-217ENST00000565832 ADCY9O60503 1353 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 ERVV-2B6SEH9 535 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 EXOC5O00471 708 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 SMARCA5O60264 1052 aaPredicted RBP7.79□□□□□ -1.16
CHD9-217ENST00000565832 A1BGP04217 495 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 SNRPA1P09661 255 aaKnown RBP7.79□□□□□ -1.16
CHD9-217ENST00000565832 NUCB1Q02818 461 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 PDE4DQ08499 809 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 BEND3Q5T5X7 828 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 COPS6Q7L5N1 327 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
CHD9-217ENST00000565832 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
CHD9-217ENST00000565832 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
CHD9-217ENST00000565832 A0A0G2JS52 829 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 PNMA6EA0A0J9YXQ4 647 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms