RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 COL5A2P05997 1499 aaPredicted RBP8.81□□□□□ -1
UBFD1-204ENST00000565634 CRB1P82279 1406 aa8.8□□□□□ -1
UBFD1-204ENST00000565634 ANKARQ7Z5J8 1434 aa8.8□□□□□ -1
UBFD1-204ENST00000565634 C11orf95C9JLR9 678 aaPredicted RBP8.8□□□□□ -1
UBFD1-204ENST00000565634 RNF223E7ERA6 249 aa8.8□□□□□ -1
UBFD1-204ENST00000565634 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
UBFD1-204ENST00000565634 TLL1O43897 1013 aa8.8□□□□□ -1
UBFD1-204ENST00000565634 PIK3C2GO75747 1445 aa8.8□□□□□ -1
UBFD1-204ENST00000565634 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
UBFD1-204ENST00000565634 COL23A1Q86Y22 540 aaPredicted RBP8.79□□□□□ -1
UBFD1-204ENST00000565634 CDK19Q9BWU1 502 aa8.79□□□□□ -1
UBFD1-204ENST00000565634 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
UBFD1-204ENST00000565634 COL24A1Q17RW2 1714 aa8.79□□□□□ -1
UBFD1-204ENST00000565634 PAPPAQ13219 1627 aa8.79□□□□□ -1
UBFD1-204ENST00000565634 ADCY9O60503 1353 aa8.78□□□□□ -1
UBFD1-204ENST00000565634 TOMM70O94826 608 aa8.78□□□□□ -1
UBFD1-204ENST00000565634 CFHP08603 1231 aa8.78□□□□□ -1
UBFD1-204ENST00000565634 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
UBFD1-204ENST00000565634 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
UBFD1-204ENST00000565634 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
UBFD1-204ENST00000565634 COL18A1P39060 1754 aa8.77□□□□□ -1.01
UBFD1-204ENST00000565634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
UBFD1-204ENST00000565634 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
UBFD1-204ENST00000565634 RBM26Q5T8P6 1007 aaKnown RBP8.77□□□□□ -1.01
UBFD1-204ENST00000565634 TRIM67Q6ZTA4 783 aa8.77□□□□□ -1.01
UBFD1-204ENST00000565634 NLRP13Q86W25 1043 aa8.77□□□□□ -1.01
UBFD1-204ENST00000565634 TULP4Q9NRJ4 1543 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
UBFD1-204ENST00000565634 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
UBFD1-204ENST00000565634 HSPA1AP0DMV8 641 aaKnown RBP8.76□□□□□ -1.01
UBFD1-204ENST00000565634 HSPA1BP0DMV9 641 aaKnown RBP8.76□□□□□ -1.01
UBFD1-204ENST00000565634 FECHP22830 423 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 SLC19A1P41440 591 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 JMYQ8N9B5 988 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 USP6P35125 1406 aa8.76□□□□□ -1.01
UBFD1-204ENST00000565634 NHSQ6T4R5 1651 aa8.75□□□□□ -1.01
UBFD1-204ENST00000565634 CPDO75976 1380 aa8.75□□□□□ -1.01
UBFD1-204ENST00000565634 ARHGEF28Q8N1W1 1705 aaKnown RBP8.75□□□□□ -1.01
UBFD1-204ENST00000565634 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
UBFD1-204ENST00000565634 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 S1PR4O95977 384 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 OATP04181 439 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 ERICH6Q7L0X2 663 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
UBFD1-204ENST00000565634 USP19O94966 1318 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 WDR17Q8IZU2 1322 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 IGSF1Q8N6C5 1336 aa8.74□□□□□ -1.01
UBFD1-204ENST00000565634 HIC1Q14526 733 aa8.73□□□□□ -1.01
UBFD1-204ENST00000565634 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
UBFD1-204ENST00000565634 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
UBFD1-204ENST00000565634 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
UBFD1-204ENST00000565634 CLSPNQ9HAW4 1339 aa8.73□□□□□ -1.01
UBFD1-204ENST00000565634 N4BP2Q86UW6 1770 aaPredicted RBP8.73□□□□□ -1.01
UBFD1-204ENST00000565634 GPR37O15354 613 aa8.72□□□□□ -1.01
UBFD1-204ENST00000565634 ANKLE1Q8NAG6 615 aa8.72□□□□□ -1.01
UBFD1-204ENST00000565634 CARD10Q9BWT7 1032 aa8.72□□□□□ -1.01
UBFD1-204ENST00000565634 RRAGCQ9HB90 399 aa8.72□□□□□ -1.01
UBFD1-204ENST00000565634 BRD4O60885 1362 aaPredicted RBP8.72□□□□□ -1.01
UBFD1-204ENST00000565634 AATKQ6ZMQ8 1374 aa8.72□□□□□ -1.01
UBFD1-204ENST00000565634 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 C16orf71Q8IYS4 520 aaPredicted RBP8.71□□□□□ -1.02
UBFD1-204ENST00000565634 CDCA7Q9BWT1 371 aaPredicted RBP8.71□□□□□ -1.02
UBFD1-204ENST00000565634 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 TONSLQ96HA7 1378 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 BCL9O00512 1426 aa8.71□□□□□ -1.02
UBFD1-204ENST00000565634 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
UBFD1-204ENST00000565634 NR1I2O75469 434 aa8.7□□□□□ -1.02
UBFD1-204ENST00000565634 ADH1BP00325 375 aa8.7□□□□□ -1.02
UBFD1-204ENST00000565634 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
UBFD1-204ENST00000565634 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
UBFD1-204ENST00000565634 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
UBFD1-204ENST00000565634 GNPATO15228 680 aa8.69□□□□□ -1.02
UBFD1-204ENST00000565634 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
UBFD1-204ENST00000565634 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
UBFD1-204ENST00000565634 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
UBFD1-204ENST00000565634 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
UBFD1-204ENST00000565634 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
UBFD1-204ENST00000565634 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 A0A0G2JLW4 131 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 SLC27A3Q5K4L6 730 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 ARHGEF25Q86VW2 580 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 CCNL1Q9UK58 526 aaPredicted RBP8.68□□□□□ -1.02
UBFD1-204ENST00000565634 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 ADGRB1O14514 1584 aa8.68□□□□□ -1.02
UBFD1-204ENST00000565634 LY75O60449 1722 aa8.67□□□□□ -1.02
UBFD1-204ENST00000565634 SRPK2P78362 688 aaKnown RBP8.67□□□□□ -1.02
UBFD1-204ENST00000565634 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
UBFD1-204ENST00000565634 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
UBFD1-204ENST00000565634 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
UBFD1-204ENST00000565634 TNS2Q63HR2 1409 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 PPIP5K1Q6PFW1 1433 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 IL2RBP14784 551 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms