RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ARFGEF2Q9Y6D5 1785 aa24.29■■□□□ 1.48
CLN6-205ENST00000564846 ACSBG1Q96GR2 724 aa24.29■■□□□ 1.48
CLN6-205ENST00000564846 SRGAP3O43295 1099 aa24.28■■□□□ 1.48
CLN6-205ENST00000564846 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
CLN6-205ENST00000564846 SLC4A9Q96Q91 983 aa24.28■■□□□ 1.48
CLN6-205ENST00000564846 CYP19A1P11511 503 aaPredicted RBP24.27■■□□□ 1.48
CLN6-205ENST00000564846 GJD4Q96KN9 370 aaPredicted RBP24.26■■□□□ 1.47
CLN6-205ENST00000564846 EXOC6BQ9Y2D4 811 aa24.26■■□□□ 1.47
CLN6-205ENST00000564846 AFF2P51816 1311 aa24.26■■□□□ 1.47
CLN6-205ENST00000564846 A0A0G2JS52 829 aa24.26■■□□□ 1.47
CLN6-205ENST00000564846 MYT1Q01538 1121 aa24.26■■□□□ 1.47
CLN6-205ENST00000564846 BMP2KLQ5H9B9 411 aa24.26■■□□□ 1.47
CLN6-205ENST00000564846 KAT6BQ8WYB5 2073 aa24.25■■□□□ 1.47
CLN6-205ENST00000564846 LRRCC1Q9C099 1032 aa24.25■■□□□ 1.47
CLN6-205ENST00000564846 THSD7AQ9UPZ6 1657 aa24.25■■□□□ 1.47
CLN6-205ENST00000564846 APBB1O00213 710 aa24.24■■□□□ 1.47
CLN6-205ENST00000564846 RAB11FIP3O75154 756 aa24.24■■□□□ 1.47
CLN6-205ENST00000564846 PLEKHM2Q8IWE5 1019 aa24.24■■□□□ 1.47
CLN6-205ENST00000564846 SMARCC1Q92922 1105 aaPredicted RBP24.24■■□□□ 1.47
CLN6-205ENST00000564846 ANP32AP39687 249 aaKnown RBP24.24■■□□□ 1.47
CLN6-205ENST00000564846 SUCLG2Q96I99 432 aa24.24■■□□□ 1.47
CLN6-205ENST00000564846 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
CLN6-205ENST00000564846 NUP188Q5SRE5 1749 aa24.23■■□□□ 1.47
CLN6-205ENST00000564846 SMARCA5O60264 1052 aaPredicted RBP24.23■■□□□ 1.47
CLN6-205ENST00000564846 KIF6Q6ZMV9 814 aa24.23■■□□□ 1.47
CLN6-205ENST00000564846 COL15A1P39059 1388 aa24.22■■□□□ 1.47
CLN6-205ENST00000564846 ATRNO75882 1429 aa24.22■■□□□ 1.47
CLN6-205ENST00000564846 HSP90AB4PQ58FF6 505 aa24.22■■□□□ 1.47
CLN6-205ENST00000564846 KAZALD1Q96I82 304 aa24.22■■□□□ 1.47
CLN6-205ENST00000564846 ZBTB3Q9H5J0 574 aa24.22■■□□□ 1.47
CLN6-205ENST00000564846 ATP5J2-PTCD1G3V325 749 aa24.21■■□□□ 1.47
CLN6-205ENST00000564846 SURF6O75683 361 aaKnown RBP24.21■■□□□ 1.47
CLN6-205ENST00000564846 BICC1Q9H694 974 aaKnown RBP24.21■■□□□ 1.47
CLN6-205ENST00000564846 TJP1Q07157 1748 aa24.21■■□□□ 1.47
CLN6-205ENST00000564846 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
CLN6-205ENST00000564846 SIK1P57059 783 aa24.21■■□□□ 1.47
CLN6-205ENST00000564846 C16orf71Q8IYS4 520 aaPredicted RBP24.21■■□□□ 1.47
CLN6-205ENST00000564846 A0A087WZG4 1122 aa24.2■■□□□ 1.46
CLN6-205ENST00000564846 CCDC191Q8NCU4 936 aa24.2■■□□□ 1.46
CLN6-205ENST00000564846 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.46
CLN6-205ENST00000564846 NOP58Q9Y2X3 529 aaKnown RBP24.2■■□□□ 1.46
CLN6-205ENST00000564846 ZNF330Q9Y3S2 320 aaPredicted RBP24.2■■□□□ 1.46
CLN6-205ENST00000564846 PALLDQ8WX93 1383 aa24.2■■□□□ 1.46
CLN6-205ENST00000564846 ONECUT3O60422 494 aaPredicted RBP24.19■■□□□ 1.46
CLN6-205ENST00000564846 ATP6V1AP38606 617 aa24.19■■□□□ 1.46
CLN6-205ENST00000564846 IL6STP40189 918 aaPredicted RBP24.19■■□□□ 1.46
CLN6-205ENST00000564846 AFDNP55196 1824 aaKnown RBP24.19■■□□□ 1.46
CLN6-205ENST00000564846 KCNQ2O43526 872 aa24.19■■□□□ 1.46
CLN6-205ENST00000564846 ZBTB1Q9Y2K1 713 aa24.19■■□□□ 1.46
CLN6-205ENST00000564846 CICQ96RK0 1608 aaPredicted RBP24.18■■□□□ 1.46
CLN6-205ENST00000564846 MAP3K15Q6ZN16 1313 aa24.18■■□□□ 1.46
CLN6-205ENST00000564846 H7C1W4 665 aa24.17■■□□□ 1.46
CLN6-205ENST00000564846 TCIRG1Q13488 830 aa24.17■■□□□ 1.46
CLN6-205ENST00000564846 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
CLN6-205ENST00000564846 ISCA1Q9BUE6 129 aa24.17■■□□□ 1.46
CLN6-205ENST00000564846 OSBPL3Q9H4L5 887 aa24.17■■□□□ 1.46
CLN6-205ENST00000564846 TRIM28Q13263 835 aaKnown RBP24.16■■□□□ 1.46
CLN6-205ENST00000564846 NPM2Q86SE8 214 aaKnown RBP24.16■■□□□ 1.46
CLN6-205ENST00000564846 OTUD7AQ8TE49 926 aaPredicted RBP24.16■■□□□ 1.46
CLN6-205ENST00000564846 KIF1BPQ96EK5 621 aa24.16■■□□□ 1.46
CLN6-205ENST00000564846 CASP7P55210 303 aa24.16■■□□□ 1.46
CLN6-205ENST00000564846 TTC22Q5TAA0 569 aa24.16■■□□□ 1.46
CLN6-205ENST00000564846 BCL11AQ9H165 835 aa24.16■■□□□ 1.46
CLN6-205ENST00000564846 RABL6Q3YEC7 729 aaPredicted RBP24.15■■□□□ 1.46
CLN6-205ENST00000564846 RHPN1Q8TCX5 695 aa24.15■■□□□ 1.46
CLN6-205ENST00000564846 CCDC87Q9NVE4 849 aa24.15■■□□□ 1.46
CLN6-205ENST00000564846 SEC24BO95487 1268 aa24.14■■□□□ 1.46
CLN6-205ENST00000564846 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.46
CLN6-205ENST00000564846 GIGYF2Q6Y7W6 1299 aaKnown RBP24.14■■□□□ 1.46
CLN6-205ENST00000564846 ERC1Q8IUD2 1116 aa24.14■■□□□ 1.46
CLN6-205ENST00000564846 UPF2Q9HAU5 1272 aaKnown RBP24.14■■□□□ 1.46
CLN6-205ENST00000564846 SALL3Q9BXA9 1300 aa24.14■■□□□ 1.45
CLN6-205ENST00000564846 GSPT1P15170 499 aaKnown RBP24.13■■□□□ 1.45
CLN6-205ENST00000564846 PDE1AP54750 535 aa24.13■■□□□ 1.45
CLN6-205ENST00000564846 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
CLN6-205ENST00000564846 ITPK1Q13572 414 aa24.13■■□□□ 1.45
CLN6-205ENST00000564846 EPHA10Q5JZY3 1008 aa24.13■■□□□ 1.45
CLN6-205ENST00000564846 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
CLN6-205ENST00000564846 ZNF831Q5JPB2 1677 aa24.12■■□□□ 1.45
CLN6-205ENST00000564846 ERVV-1B6SEH8 477 aa24.12■■□□□ 1.45
CLN6-205ENST00000564846 CRKLP46109 303 aaKnown RBP24.12■■□□□ 1.45
CLN6-205ENST00000564846 ARXQ96QS3 562 aa24.12■■□□□ 1.45
CLN6-205ENST00000564846 QTRT2Q9H974 415 aaKnown RBP24.12■■□□□ 1.45
CLN6-205ENST00000564846 EIF5P55010 431 aaKnown RBP24.11■■□□□ 1.45
CLN6-205ENST00000564846 MX1P20591 662 aa24.11■■□□□ 1.45
CLN6-205ENST00000564846 DZIP3Q86Y13 1208 aaKnown RBP24.11■■□□□ 1.45
CLN6-205ENST00000564846 SEPT12Q8IYM1 358 aa24.11■■□□□ 1.45
CLN6-205ENST00000564846 JARID2Q92833 1246 aaPredicted RBP24.11■■□□□ 1.45
CLN6-205ENST00000564846 IL1RAPL2Q9NP60 686 aa24.1■■□□□ 1.45
CLN6-205ENST00000564846 STAP2Q9UGK3 403 aa24.1■■□□□ 1.45
CLN6-205ENST00000564846 RREB1Q92766 1687 aa24.1■■□□□ 1.45
CLN6-205ENST00000564846 PA2G4Q9UQ80 394 aaKnown RBP24.09■■□□□ 1.45
CLN6-205ENST00000564846 NHSQ6T4R5 1651 aa24.09■■□□□ 1.45
CLN6-205ENST00000564846 AOX1Q06278 1338 aa24.09■■□□□ 1.45
CLN6-205ENST00000564846 G3BP1Q13283 466 aaKnown RBP eCLIP24.08■■□□□ 1.45
CLN6-205ENST00000564846 CDC45O75419 566 aa24.08■■□□□ 1.44
CLN6-205ENST00000564846 FOXO4P98177 505 aa24.08■■□□□ 1.44
CLN6-205ENST00000564846 HLFQ16534 295 aa24.08■■□□□ 1.44
CLN6-205ENST00000564846 IPO9Q96P70 1041 aaKnown RBP24.08■■□□□ 1.44
CLN6-205ENST00000564846 COPRSQ9NQ92 184 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms