RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 TERF2Q15554 542 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 ATP10DQ9P241 1426 aa19.45■□□□□ 0.7
LINC00554-201ENST00000564841 RPAP1Q9BWH6 1393 aaPredicted RBP19.45■□□□□ 0.7
LINC00554-201ENST00000564841 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
LINC00554-201ENST00000564841 DRC7Q8IY82 874 aa19.45■□□□□ 0.7
LINC00554-201ENST00000564841 KIF18AQ8NI77 898 aa19.45■□□□□ 0.7
LINC00554-201ENST00000564841 PEAK1Q9H792 1746 aa19.45■□□□□ 0.7
LINC00554-201ENST00000564841 MSH6P52701 1360 aa19.44■□□□□ 0.7
LINC00554-201ENST00000564841 CPA1P15085 419 aa19.44■□□□□ 0.7
LINC00554-201ENST00000564841 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
LINC00554-201ENST00000564841 INTS4Q96HW7 963 aaKnown RBP19.44■□□□□ 0.7
LINC00554-201ENST00000564841 PDIA4P13667 645 aaKnown RBP19.43■□□□□ 0.7
LINC00554-201ENST00000564841 TAF3Q5VWG9 929 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 UBE2HP62256 183 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 CERS3Q8IU89 383 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 MAP4K4O95819 1239 aaPredicted RBP19.43■□□□□ 0.7
LINC00554-201ENST00000564841 SYT1P21579 422 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
LINC00554-201ENST00000564841 GABPB1Q06547 395 aaPredicted RBP19.42■□□□□ 0.7
LINC00554-201ENST00000564841 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 CAPN2P17655 700 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 MCM2P49736 904 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 NBPF6Q5VWK0 638 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 CKAP2LQ8IYA6 745 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
LINC00554-201ENST00000564841 NBPF4Q96M43 638 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 DLG5Q8TDM6 1919 aa19.42■□□□□ 0.7
LINC00554-201ENST00000564841 ZSCAN22P10073 491 aaPredicted RBP19.41■□□□□ 0.7
LINC00554-201ENST00000564841 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
LINC00554-201ENST00000564841 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
LINC00554-201ENST00000564841 ATF3P18847 181 aa19.41■□□□□ 0.7
LINC00554-201ENST00000564841 ARID5BQ14865 1188 aa19.41■□□□□ 0.7
LINC00554-201ENST00000564841 MORC2Q9Y6X9 1032 aaPredicted RBP19.41■□□□□ 0.7
LINC00554-201ENST00000564841 NRKQ7Z2Y5 1582 aa19.4■□□□□ 0.7
LINC00554-201ENST00000564841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.4■□□□□ 0.7
LINC00554-201ENST00000564841 RPAP2Q8IXW5 612 aaPredicted RBP19.4■□□□□ 0.7
LINC00554-201ENST00000564841 CCDC112Q8NEF3 446 aa19.4■□□□□ 0.7
LINC00554-201ENST00000564841 RTL1A6NKG5 1358 aa19.4■□□□□ 0.7
LINC00554-201ENST00000564841 USP27XA6NNY8 438 aa19.4■□□□□ 0.7
LINC00554-201ENST00000564841 DDX54Q8TDD1 881 aaKnown RBP19.4■□□□□ 0.7
LINC00554-201ENST00000564841 STX6O43752 255 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 GCP02774 474 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 CHMLP26374 656 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 SMTNL1A8MU46 457 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 CHL1O00533 1208 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
LINC00554-201ENST00000564841 ZNF215Q9UL58 517 aaPredicted RBP19.39■□□□□ 0.69
LINC00554-201ENST00000564841 PIK3C2AO00443 1686 aa19.39■□□□□ 0.69
LINC00554-201ENST00000564841 LARGE1O95461 756 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 MCCP23508 829 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 TMEM87AQ8NBN3 555 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 ANKARQ7Z5J8 1434 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 ZBTB9Q96C00 473 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
LINC00554-201ENST00000564841 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
LINC00554-201ENST00000564841 NALCNQ8IZF0 1738 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 ADGRL3Q9HAR2 1447 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 F13A1P00488 732 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 CACTINQ8WUQ7 758 aaKnown RBP19.37■□□□□ 0.69
LINC00554-201ENST00000564841 GNAT3A8MTJ3 354 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 CCDC144BQ3MJ40 725 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 ZSCAN25Q6NSZ9 544 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 CCDC144CPQ8IYA2 1237 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 TIGD1Q96MW7 591 aa19.37■□□□□ 0.69
LINC00554-201ENST00000564841 RBM6P78332 1123 aaKnown RBP19.36■□□□□ 0.69
LINC00554-201ENST00000564841 KRT222Q8N1A0 295 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
LINC00554-201ENST00000564841 TRIM5Q9C035 493 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 LIG1P18858 919 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 FBXO38Q6PIJ6 1188 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 FERMT3Q86UX7 667 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 RGS12O14924 1447 aa19.36■□□□□ 0.69
LINC00554-201ENST00000564841 ELF2Q15723 593 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 MRVI1Q9Y6F6 885 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 EIF2S2P20042 333 aaKnown RBP19.35■□□□□ 0.69
LINC00554-201ENST00000564841 AK2P54819 239 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 MPRIPQ6WCQ1 1025 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
LINC00554-201ENST00000564841 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 CCDC192P0DO97 292 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 RASEFQ8IZ41 740 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 IP6K1Q92551 441 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 LGR6Q9HBX8 967 aa19.35■□□□□ 0.69
LINC00554-201ENST00000564841 VPS37CA5D8V6 355 aaPredicted RBP19.34■□□□□ 0.69
LINC00554-201ENST00000564841 RUFY3Q7L099 469 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 TRMT1Q9NXH9 659 aaKnown RBP19.34■□□□□ 0.69
LINC00554-201ENST00000564841 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 ANO6Q4KMQ2 910 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 CCDC83Q8IWF9 413 aa19.34■□□□□ 0.69
LINC00554-201ENST00000564841 TRIM34Q9BYJ4 488 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms