RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-209	ENST00000564255	ZC3H6	P61129	1189 aa	Known RBP	4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	AAMP	Q13685	434 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	NIF3L1	Q9GZT8	377 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	ZFAND3	Q9H8U3	227 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	RNF19A	Q9NV58	838 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	KLK14	Q9P0G3	267 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	USP35	Q9P2H5	1018 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	BCS1L	Q9Y276	419 aa		4.13	□□□□□ -1.75
CHD9-209	ENST00000564255	SPATA31C2	B4DYI2	1134 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	MAPK8	P45983	427 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	XPC	Q01831	940 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	ALG1L	Q6GMV1	187 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	CSRNP1	Q96S65	589 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	ZNF232	Q9UNY5	417 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	GPC6	Q9Y625	555 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	PARP3	Q9Y6F1	533 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	GDF9	O60383	454 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	WDR4	P57081	412 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	MEIOB	Q8N635	442 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	FRMD6	Q96NE9	622 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	SETDB2	Q96T68	719 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	METTL5	Q9NRN9	209 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	ZDHHC3	Q9NYG2	299 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	PNMA6F	A0A0J9YX94	578 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255		J3QL48	77 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	ATP2B2	Q01814	1243 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	RAD51AP2	Q09MP3	1159 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	TMEM214	Q6NUQ4	689 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	METTL16	Q86W50	562 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	FBF1	Q8TES7	1133 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	DNAJC25	Q9H1X3	360 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	TOR4A	Q9NXH8	423 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	FAM13B	Q9NYF5	915 aa		4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	DMGDH	Q9UI17	866 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255		V9GY48	417 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD9-209	ENST00000564255	NEFL	P07196	543 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	SMPD1	P17405	629 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	RELB	Q01201	579 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	DNM1	Q05193	864 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	C4orf17	Q53FE4	359 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	TREML1	Q86YW5	311 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	GGNBP2	Q9H3C7	697 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	ZNF395	Q9H8N7	513 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	PLA2G2E	Q9NZK7	142 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255		A0A0G2JS52	829 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	MICAL2	O94851	1124 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	RPLP1	P05386	114 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	GTF2E1	P29083	439 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	FOXC1	Q12948	553 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	PSMD2	Q13200	908 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	HIF1A	Q16665	826 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	GNAS	Q5JWF2	1037 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	IER5	Q5VY09	327 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	XKR5	Q6UX68	686 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	SREK1	Q8WXA9	508 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	DRC1	Q96MC2	740 aa		4.11	□□□□□ -1.75
CHD9-209	ENST00000564255	TGFBR3L	H3BV60	316 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	OPLAH	O14841	1288 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	SORBS3	O60504	671 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	ERCC5	P28715	1186 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	RHPN1	Q8TCX5	695 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	SPINT1	O43278	529 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	PCSK2	P16519	638 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	FANCC	Q00597	558 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	NAALADL2	Q58DX5	795 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	SUSD3	Q96L08	255 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	FAM161B	Q96MY7	647 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	AK5	Q9Y6K8	562 aa		4.1	□□□□□ -1.75
CHD9-209	ENST00000564255	GNA15	P30679	374 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	PLA2G4A	P47712	749 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	CYP4X1	Q8N118	509 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	TMEM87A	Q8NBN3	555 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	GPR152	Q8TDT2	470 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	NUDT16	Q96DE0	195 aa	Known RBP	4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	MRS2	Q9HD23	443 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	WDR44	Q5JSH3	913 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	PIK3R5	Q8WYR1	880 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	KLRG1	Q96E93	195 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	TSEN34	Q9BSV6	310 aa	Known RBP	4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	VTI1B	Q9UEU0	232 aa		4.09	□□□□□ -1.75
CHD9-209	ENST00000564255	TTC24	A2A3L6	582 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	EIF1AY	O14602	144 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	PRR20E	P86478	221 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	PRR20C	P86479	221 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	PRR20D	P86480	221 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	PRR20B	P86481	221 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	PRR20A	P86496	221 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	ORC1	Q13415	861 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	SLC27A3	Q5K4L6	730 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	SLC43A3	Q8NBI5	491 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	TGIF2	Q9GZN2	237 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	LOC100996750	A0A140TA64	210 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	CTSH	P09668	335 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	NBPF1	Q3BBV0	1214 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	HPS1	Q92902	700 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	RNF34	Q969K3	372 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	KRTAP4-6	Q9BYQ5	205 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	ANKIB1	Q9P2G1	1089 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	GIPC1	O14908	333 aa		4.08	□□□□□ -1.76
CHD9-209	ENST00000564255	INPP5B	P32019	993 aa		4.08	□□□□□ -1.76

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