RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NBPF5PQ86XG9 351 aaPredicted RBP27.83■■■□□ 2.05
HERC2-204ENST00000563945 MASTLQ96GX5 879 aa27.83■■■□□ 2.05
HERC2-204ENST00000563945 TAOK3Q9H2K8 898 aa27.83■■■□□ 2.05
HERC2-204ENST00000563945 PPP2R1AP30153 589 aa27.82■■■□□ 2.04
HERC2-204ENST00000563945 PIP4K2AP48426 406 aaPredicted RBP27.82■■■□□ 2.04
HERC2-204ENST00000563945 CCDC88AQ3V6T2 1871 aa27.82■■■□□ 2.04
HERC2-204ENST00000563945 SCN7AQ01118 1682 aa27.81■■■□□ 2.04
HERC2-204ENST00000563945 JMYQ8N9B5 988 aa27.81■■■□□ 2.04
HERC2-204ENST00000563945 HTATSF1O43719 755 aaKnown RBP27.8■■■□□ 2.04
HERC2-204ENST00000563945 SRGNP10124 158 aa27.8■■■□□ 2.04
HERC2-204ENST00000563945 PRPF40BQ6NWY9 871 aaKnown RBP27.79■■■□□ 2.04
HERC2-204ENST00000563945 ANKRD31Q8N7Z5 1873 aa27.78■■■□□ 2.04
HERC2-204ENST00000563945 LTBP3Q9NS15 1303 aa27.78■■■□□ 2.04
HERC2-204ENST00000563945 TPTE2Q6XPS3 522 aa27.78■■■□□ 2.04
HERC2-204ENST00000563945 PRAMEF22A3QJZ6 481 aa27.77■■■□□ 2.04
HERC2-204ENST00000563945 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
HERC2-204ENST00000563945 TAF7Q15545 349 aaPredicted RBP27.77■■■□□ 2.04
HERC2-204ENST00000563945 TIAM2Q8IVF5 1701 aa27.77■■■□□ 2.04
HERC2-204ENST00000563945 NIP7Q9Y221 180 aaKnown RBP eCLIP27.76■■■□□ 2.03
HERC2-204ENST00000563945 GTF2E1P29083 439 aaPredicted RBP27.75■■■□□ 2.03
HERC2-204ENST00000563945 NPR1P16066 1061 aa27.74■■■□□ 2.03
HERC2-204ENST00000563945 FAM177BA6PVY3 158 aa27.73■■■□□ 2.03
HERC2-204ENST00000563945 POTECB2RU33 542 aa27.73■■■□□ 2.03
HERC2-204ENST00000563945 CCDC93Q567U6 631 aa27.73■■■□□ 2.03
HERC2-204ENST00000563945 RGL2O15211 777 aa27.71■■■□□ 2.03
HERC2-204ENST00000563945 DDNO94850 711 aaPredicted RBP27.71■■■□□ 2.03
HERC2-204ENST00000563945 COL11A2P13942 1736 aaPredicted RBP27.71■■■□□ 2.03
HERC2-204ENST00000563945 FER1L6Q2WGJ9 1857 aa27.71■■■□□ 2.03
HERC2-204ENST00000563945 SLX4Q8IY92 1834 aa27.7■■■□□ 2.02
HERC2-204ENST00000563945 NBPF26B4DH59 902 aa27.7■■■□□ 2.02
HERC2-204ENST00000563945 CHADLQ6NUI6 762 aa27.7■■■□□ 2.02
HERC2-204ENST00000563945 NBPF10Q6P3W6 841 aaKnown RBP27.7■■■□□ 2.02
HERC2-204ENST00000563945 NBPF15Q8N660 670 aa27.7■■■□□ 2.02
HERC2-204ENST00000563945 PNISRQ8TF01 805 aaKnown RBP27.7■■■□□ 2.02
HERC2-204ENST00000563945 DICER1Q9UPY3 1922 aaKnown RBP27.69■■■□□ 2.02
HERC2-204ENST00000563945 BCORQ6W2J9 1755 aa27.69■■■□□ 2.02
HERC2-204ENST00000563945 MIS18AQ9NYP9 233 aa27.69■■■□□ 2.02
HERC2-204ENST00000563945 IQCA1LA6NCM1 817 aa27.68■■■□□ 2.02
HERC2-204ENST00000563945 ALDH1B1P30837 517 aa27.68■■■□□ 2.02
HERC2-204ENST00000563945 NGEFQ8N5V2 710 aa27.68■■■□□ 2.02
HERC2-204ENST00000563945 COL13A1Q5TAT6 717 aaPredicted RBP27.67■■■□□ 2.02
HERC2-204ENST00000563945 FKBP4Q02790 459 aaKnown RBP eCLIP27.66■■■□□ 2.02
HERC2-204ENST00000563945 RTKN2Q8IZC4 609 aa27.66■■■□□ 2.02
HERC2-204ENST00000563945 C7orf43Q8WVR3 580 aa27.66■■■□□ 2.02
HERC2-204ENST00000563945 CACNA1SQ13698 1873 aa27.66■■■□□ 2.02
HERC2-204ENST00000563945 KLRG2A4D1S0 409 aaPredicted RBP27.65■■■□□ 2.02
HERC2-204ENST00000563945 NYXQ9GZU5 481 aa27.65■■■□□ 2.02
HERC2-204ENST00000563945 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
HERC2-204ENST00000563945 HLFQ16534 295 aa27.64■■■□□ 2.02
HERC2-204ENST00000563945 RRP7AQ9Y3A4 280 aaKnown RBP27.64■■■□□ 2.02
HERC2-204ENST00000563945 KIF6Q6ZMV9 814 aa27.63■■■□□ 2.01
HERC2-204ENST00000563945 ZNF277Q9NRM2 450 aaPredicted RBP27.63■■■□□ 2.01
HERC2-204ENST00000563945 HSPA1AP0DMV8 641 aaKnown RBP27.62■■■□□ 2.01
HERC2-204ENST00000563945 HSPA1BP0DMV9 641 aaKnown RBP27.62■■■□□ 2.01
HERC2-204ENST00000563945 TNS4Q8IZW8 715 aa27.62■■■□□ 2.01
HERC2-204ENST00000563945 CREBZFQ9NS37 354 aa27.61■■■□□ 2.01
HERC2-204ENST00000563945 ERVV-1B6SEH8 477 aa27.6■■■□□ 2.01
HERC2-204ENST00000563945 LDHDQ86WU2 507 aa27.6■■■□□ 2.01
HERC2-204ENST00000563945 MAPK8IP3Q9UPT6 1336 aa27.6■■■□□ 2.01
HERC2-204ENST00000563945 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
HERC2-204ENST00000563945 POTEIP0CG38 1075 aa27.59■■■□□ 2.01
HERC2-204ENST00000563945 POTEJP0CG39 1038 aa27.59■■■□□ 2.01
HERC2-204ENST00000563945 SYNE4Q8N205 404 aa27.59■■■□□ 2.01
HERC2-204ENST00000563945 L3MBTL3Q96JM7 780 aaPredicted RBP27.59■■■□□ 2.01
HERC2-204ENST00000563945 CLEC11AQ9Y240 323 aa27.59■■■□□ 2.01
HERC2-204ENST00000563945 MYL6BP14649 208 aa27.58■■■□□ 2.01
HERC2-204ENST00000563945 NFE2L2Q16236 605 aa27.58■■■□□ 2.01
HERC2-204ENST00000563945 EAPPQ56P03 285 aaPredicted RBP27.58■■■□□ 2.01
HERC2-204ENST00000563945 TAF1DQ9H5J8 278 aaPredicted RBP27.58■■■□□ 2.01
HERC2-204ENST00000563945 EIF4A1P60842 406 aaKnown RBP27.57■■■□□ 2
HERC2-204ENST00000563945 OLFM4Q6UX06 510 aa27.57■■■□□ 2
HERC2-204ENST00000563945 JDP2Q8WYK2 163 aa27.57■■■□□ 2
HERC2-204ENST00000563945 RPGRQ92834 1020 aaKnown RBP27.57■■■□□ 2
HERC2-204ENST00000563945 MKRN1Q9UHC7 482 aaKnown RBP27.57■■■□□ 2
HERC2-204ENST00000563945 HACL1Q9UJ83 578 aa27.57■■■□□ 2
HERC2-204ENST00000563945 MAP3K15Q6ZN16 1313 aa27.57■■■□□ 2
HERC2-204ENST00000563945 IARSP41252 1262 aaKnown RBP27.56■■■□□ 2
HERC2-204ENST00000563945 CC2D2BQ6DHV5 1058 aa27.56■■■□□ 2
HERC2-204ENST00000563945 NUTM1Q86Y26 1132 aa27.56■■■□□ 2
HERC2-204ENST00000563945 CAPN15O75808 1086 aa27.55■■■□□ 2
HERC2-204ENST00000563945 GPTP24298 496 aa27.54■■■□□ 2
HERC2-204ENST00000563945 THUMPD2Q9BTF0 503 aaKnown RBP27.54■■■□□ 2
HERC2-204ENST00000563945 ZBTB3Q9H5J0 574 aa27.54■■■□□ 2
HERC2-204ENST00000563945 ZNF541Q9H0D2 1346 aa27.53■■■□□ 2
HERC2-204ENST00000563945 TTLL7Q6ZT98 887 aa27.53■■■□□ 2
HERC2-204ENST00000563945 PLEKHF1Q96S99 279 aa27.53■■■□□ 2
HERC2-204ENST00000563945 EPHX2P34913 555 aa27.52■■■□□ 2
HERC2-204ENST00000563945 PNMA8AQ86V59 439 aaPredicted RBP27.52■■■□□ 2
HERC2-204ENST00000563945 TMX4Q9H1E5 349 aaPredicted RBP27.52■■■□□ 2
HERC2-204ENST00000563945 SCN4AP35499 1836 aa27.52■■■□□ 2
HERC2-204ENST00000563945 EIF6P56537 245 aaKnown RBP27.51■■□□□ 1.99
HERC2-204ENST00000563945 CRY2Q49AN0 593 aa27.51■■□□□ 1.99
HERC2-204ENST00000563945 RBM17Q96I25 401 aaKnown RBP27.51■■□□□ 1.99
HERC2-204ENST00000563945 PSMD1Q99460 953 aa27.51■■□□□ 1.99
HERC2-204ENST00000563945 LAMB4A4D0S4 1761 aa27.5■■□□□ 1.99
HERC2-204ENST00000563945 FZD9O00144 591 aa27.5■■□□□ 1.99
HERC2-204ENST00000563945 GRIPAP1Q4V328 841 aa27.5■■□□□ 1.99
HERC2-204ENST00000563945 PPP1R42Q7Z4L9 355 aa27.5■■□□□ 1.99
HERC2-204ENST00000563945 TSPYL4Q9UJ04 414 aa27.5■■□□□ 1.99
HERC2-204ENST00000563945 TMEM88BA6NKF7 163 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms