RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 TRPM3Q9HCF6 1732 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 COL16A1Q07092 1604 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 TNS3Q68CZ2 1445 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 BRD4O60885 1362 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 SPATA31A3Q5VYP0 1347 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 S1PR4O95977 384 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 MMP16P51512 607 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 DDX10Q13206 875 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 PRDM9Q9NQV7 894 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 AKAP12Q02952 1782 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
HERPUD1-207ENST00000563781 TRAK2O60296 914 aa7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 JUNDP17535 347 aa7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 HSPA1LP34931 641 aa7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 PSME1Q06323 249 aa7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 PPP1R18Q6NYC8 613 aa7.12□□□□□ -1.27
HERPUD1-207ENST00000563781 OVOS2A0A0J9YW53 1432 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 OVOS2Q6IE36 1432 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 USP31Q70CQ4 1352 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 TTC21AQ8NDW8 1320 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 FYB1O15117 783 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 TMEM259Q4ZIN3 620 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 NME9Q86XW9 330 aa7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-207ENST00000563781 PNPLA6Q8IY17 1366 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 NPC1L1Q9UHC9 1359 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 PIK3C2AO00443 1686 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 ALS2Q96Q42 1657 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 USP19O94966 1318 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 RNF223E7ERA6 249 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 AP1G2O75843 785 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 GGCXP38435 758 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 CTDSPL2Q05D32 466 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 KCTD17Q8N5Z5 321 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 PHLPP1O60346 1717 aa7.1□□□□□ -1.27
HERPUD1-207ENST00000563781 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 CGNL1Q0VF96 1302 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 A0A0G2JS52 829 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 PPEF1O14829 653 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 TSC1Q92574 1164 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 LRRC59Q96AG4 307 aaKnown RBP7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 GGNBP2Q9H3C7 697 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 KNSTRNQ9Y448 316 aa7.09□□□□□ -1.27
HERPUD1-207ENST00000563781 NSD2O96028 1365 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 JCADQ9P266 1359 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 SLIT3O75094 1523 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 PTPRNQ16849 979 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 ABTB2Q8N961 1025 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 BANK1Q8NDB2 785 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 USP54Q70EL1 1684 aa7.08□□□□□ -1.28
HERPUD1-207ENST00000563781 MARF1Q9Y4F3 1742 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 NFAT5O94916 1531 aa7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 ANKLE1Q8NAG6 615 aa7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 NUDT12Q9BQG2 462 aa7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 EVA1BQ9NVM1 165 aa7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 COL22A1Q8NFW1 1626 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 PARD3Q8TEW0 1356 aa7.07□□□□□ -1.28
HERPUD1-207ENST00000563781 SHPRHQ149N8 1683 aa7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 CC2D1BQ5T0F9 858 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 NLRP13Q86W25 1043 aa7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 COG3Q96JB2 828 aa7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 FCF1Q9Y324 198 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 CRYBG1Q9Y4K1 1723 aa7.06□□□□□ -1.28
HERPUD1-207ENST00000563781 LRP6O75581 1613 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 GCP02774 474 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 USP17L8P0C7I0 530 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 CCNYL3P0C7X3 344 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 FBLN1P23142 703 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 CNGB1Q14028 1251 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 MORC1Q86VD1 984 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 LRRN4Q8WUT4 740 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 AATKQ6ZMQ8 1374 aa7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 PHRF1Q9P1Y6 1649 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-207ENST00000563781 ABCA3Q99758 1704 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 KIF20BQ96Q89 1820 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 SMG6Q86US8 1419 aaKnown RBP7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 KCNH2Q12809 1159 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 ARHGEF25Q86VW2 580 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 CCDC24Q8N4L8 307 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 PRKRIP1Q9H875 184 aaPredicted RBP7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 CPDO75976 1380 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 KIAA0232Q92628 1395 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 ANKRD26Q9UPS8 1709 aa7.04□□□□□ -1.28
HERPUD1-207ENST00000563781 MAP3K19Q56UN5 1328 aa7.03□□□□□ -1.28
HERPUD1-207ENST00000563781 TNNT2P45379 298 aaPredicted RBP7.03□□□□□ -1.28
HERPUD1-207ENST00000563781 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms