RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
LINC00254-201ENST00000563416 ATXN7O15265 892 aaPredicted RBP9.28□□□□□ -0.92
LINC00254-201ENST00000563416 RTN1Q16799 776 aa9.28□□□□□ -0.92
LINC00254-201ENST00000563416 MBIPQ9NS73 344 aa9.28□□□□□ -0.92
LINC00254-201ENST00000563416 MX2P20592 715 aa9.27□□□□□ -0.93
LINC00254-201ENST00000563416 UBAP2LQ14157 1087 aaKnown RBP9.27□□□□□ -0.93
LINC00254-201ENST00000563416 OCLNQ16625 522 aa9.27□□□□□ -0.93
LINC00254-201ENST00000563416 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
LINC00254-201ENST00000563416 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
LINC00254-201ENST00000563416 CXXC1Q9P0U4 656 aaPredicted RBP9.27□□□□□ -0.93
LINC00254-201ENST00000563416 FKBP5Q13451 457 aaPredicted RBP9.26□□□□□ -0.93
LINC00254-201ENST00000563416 GAS6Q14393 721 aa9.26□□□□□ -0.93
LINC00254-201ENST00000563416 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
LINC00254-201ENST00000563416 USTQ9Y2C2 406 aa9.26□□□□□ -0.93
LINC00254-201ENST00000563416 BNIP3LO60238 219 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 PTCD1O75127 700 aaKnown RBP9.25□□□□□ -0.93
LINC00254-201ENST00000563416 FAM157BP0CG42 384 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 KRT76Q01546 638 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
LINC00254-201ENST00000563416 PDE4CQ08493 712 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 COL26A1Q96A83 441 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
LINC00254-201ENST00000563416 DCDC2BA2VCK2 349 aa9.24□□□□□ -0.93
LINC00254-201ENST00000563416 TMEM88BA6NKF7 163 aa9.24□□□□□ -0.93
LINC00254-201ENST00000563416 KHNYNO15037 678 aaKnown RBP9.24□□□□□ -0.93
LINC00254-201ENST00000563416 FGFR3P22607 806 aa9.24□□□□□ -0.93
LINC00254-201ENST00000563416 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
LINC00254-201ENST00000563416 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
LINC00254-201ENST00000563416 LAMC2Q13753 1193 aa9.23□□□□□ -0.93
LINC00254-201ENST00000563416 MYO19Q96H55 970 aa9.23□□□□□ -0.93
LINC00254-201ENST00000563416 MAP2K3P46734 347 aa9.22□□□□□ -0.93
LINC00254-201ENST00000563416 TNP2Q05952 138 aa9.22□□□□□ -0.93
LINC00254-201ENST00000563416 HSH2DQ96JZ2 352 aa9.22□□□□□ -0.93
LINC00254-201ENST00000563416 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
LINC00254-201ENST00000563416 IGF1RP08069 1367 aa9.22□□□□□ -0.93
LINC00254-201ENST00000563416 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 BMP4P12644 408 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 IER5Q5VY09 327 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 B4GALNT3Q6L9W6 998 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 CEP63Q96MT8 703 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 MKNK1Q9BUB5 465 aa9.21□□□□□ -0.94
LINC00254-201ENST00000563416 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 SLURP2P0DP57 97 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 DGKZQ13574 1117 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 ZNF280CQ8ND82 737 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 MARK1Q9P0L2 795 aa9.2□□□□□ -0.94
LINC00254-201ENST00000563416 EFSO43281 561 aa9.19□□□□□ -0.94
LINC00254-201ENST00000563416 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
LINC00254-201ENST00000563416 BTLAQ7Z6A9 289 aa9.19□□□□□ -0.94
LINC00254-201ENST00000563416 BRD7Q9NPI1 651 aa9.19□□□□□ -0.94
LINC00254-201ENST00000563416 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
LINC00254-201ENST00000563416 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 EPB42P16452 691 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 TYRO3Q06418 890 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 KLRG1Q96E93 195 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 KLK14Q9P0G3 267 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 MTMR7Q9Y216 660 aa9.18□□□□□ -0.94
LINC00254-201ENST00000563416 CD33P20138 364 aa9.17□□□□□ -0.94
LINC00254-201ENST00000563416 SSFA2P28290 1259 aa9.17□□□□□ -0.94
LINC00254-201ENST00000563416 CTBSQ01459 385 aa9.17□□□□□ -0.94
LINC00254-201ENST00000563416 COX20Q5RI15 118 aa9.17□□□□□ -0.94
LINC00254-201ENST00000563416 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
LINC00254-201ENST00000563416 MAP3K10Q02779 954 aa9.16□□□□□ -0.94
LINC00254-201ENST00000563416 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
LINC00254-201ENST00000563416 SVOPQ8N4V2 548 aa9.16□□□□□ -0.94
LINC00254-201ENST00000563416 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
LINC00254-201ENST00000563416 LRFN2Q9ULH4 789 aa9.16□□□□□ -0.94
LINC00254-201ENST00000563416 KCNQ4P56696 695 aa9.15□□□□□ -0.94
LINC00254-201ENST00000563416 NEUROD1Q13562 356 aa9.15□□□□□ -0.94
LINC00254-201ENST00000563416 IFT43Q96FT9 208 aa9.15□□□□□ -0.94
LINC00254-201ENST00000563416 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
LINC00254-201ENST00000563416 AVENQ9NQS1 362 aaPredicted RBP9.15□□□□□ -0.94
LINC00254-201ENST00000563416 PRR12Q9ULL5 1215 aa9.15□□□□□ -0.94
LINC00254-201ENST00000563416 KCNH4Q9UQ05 1017 aa9.15□□□□□ -0.94
LINC00254-201ENST00000563416 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 ARAFP10398 606 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 IDH3AP50213 366 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 ENAMQ9NRM1 1142 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 BCS1LQ9Y276 419 aa9.14□□□□□ -0.95
LINC00254-201ENST00000563416 C2CD2LO14523 706 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 ARSDP51689 593 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 SFSWAPQ12872 951 aaKnown RBP9.13□□□□□ -0.95
LINC00254-201ENST00000563416 CAPN12Q6ZSI9 719 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 SAP130Q9H0E3 1048 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 LRRC4BQ9NT99 713 aa9.13□□□□□ -0.95
LINC00254-201ENST00000563416 DMGDHQ9UI17 866 aaKnown RBP9.13□□□□□ -0.95
LINC00254-201ENST00000563416 MICAL2O94851 1124 aa9.12□□□□□ -0.95
LINC00254-201ENST00000563416 BCRP11274 1271 aa9.12□□□□□ -0.95
LINC00254-201ENST00000563416 ZNF385CQ66K41 422 aaPredicted RBP9.12□□□□□ -0.95
LINC00254-201ENST00000563416 TREML1Q86YW5 311 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms