RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 L3MBTL2Q969R5 705 aa7.5□□□□□ -1.21
HDGFL3-202ENST00000562702 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
HDGFL3-202ENST00000562702 PARP3Q9Y6F1 533 aa7.5□□□□□ -1.21
HDGFL3-202ENST00000562702 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 H2AFB2P0C5Z0 115 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 ADH7P40394 386 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 NRG1Q02297 640 aaPredicted RBP7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 PSME1Q06323 249 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 IRF5Q13568 498 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 MDFIQ99750 246 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 NOD1Q9Y239 953 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 CHMP3Q9Y3E7 222 aa7.49□□□□□ -1.21
HDGFL3-202ENST00000562702 TXLNAP40222 546 aa7.48□□□□□ -1.21
HDGFL3-202ENST00000562702 TEAD4Q15561 434 aa7.48□□□□□ -1.21
HDGFL3-202ENST00000562702 GRIK4Q16099 956 aa7.48□□□□□ -1.21
HDGFL3-202ENST00000562702 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
HDGFL3-202ENST00000562702 LILRB5O75023 590 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 ALBP02768 609 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 NOS2P35228 1153 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 ABL2P42684 1182 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 RAC1P63000 192 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 SPEM2Q0P670 501 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 LRP8Q14114 963 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 FOXD4L6Q3SYB3 417 aaPredicted RBP7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 USP3Q9Y6I4 520 aa7.47□□□□□ -1.21
HDGFL3-202ENST00000562702 EML1O00423 815 aa7.46□□□□□ -1.22
HDGFL3-202ENST00000562702 PCDHGA11Q9Y5H2 935 aa7.46□□□□□ -1.22
HDGFL3-202ENST00000562702 SERTM1A2A2V5 107 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 NID1P14543 1247 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 ELNP15502 786 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 GTF2IP78347 998 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 TXNRD3Q86VQ6 643 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 KRTAP1-3Q8IUG1 177 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 CEP63Q96MT8 703 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 SLC30A3Q99726 388 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 STARD13Q9Y3M8 1113 aa7.45□□□□□ -1.22
HDGFL3-202ENST00000562702 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
HDGFL3-202ENST00000562702 BRD7Q9NPI1 651 aa7.44□□□□□ -1.22
HDGFL3-202ENST00000562702 ZNF358Q9NW07 568 aa7.44□□□□□ -1.22
HDGFL3-202ENST00000562702 BRPF1P55201 1214 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 COL9A3Q14050 684 aaPredicted RBP7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 ADGRE1Q14246 886 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 MBTPS1Q14703 1052 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 C8orf86Q6ZUL3 223 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 KCNH4Q9UQ05 1017 aa7.43□□□□□ -1.22
HDGFL3-202ENST00000562702 SKIP12755 728 aa7.42□□□□□ -1.22
HDGFL3-202ENST00000562702 LENG1Q96BZ8 264 aaPredicted RBP7.42□□□□□ -1.22
HDGFL3-202ENST00000562702 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 TBC1D8BQ0IIM8 1120 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 C20orf204Q6ZNR8 217 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 UBE2OQ9C0C9 1292 aaKnown RBP7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 EFCC1Q9HA90 598 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 USP21Q9UK80 565 aa7.41□□□□□ -1.22
HDGFL3-202ENST00000562702 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 SFI1A8K8P3 1242 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 KCNQ4P56696 695 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 HIF1AQ16665 826 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 TRIM50Q86XT4 487 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 WWC1Q8IX03 1113 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 NFATC2IPQ8NCF5 419 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 BHMTQ93088 406 aa7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 JPH1Q9HDC5 661 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-202ENST00000562702 HYAL3O43820 417 aaPredicted RBP7.39□□□□□ -1.23
HDGFL3-202ENST00000562702 SELPP16109 830 aa7.39□□□□□ -1.23
HDGFL3-202ENST00000562702 IGFLR1Q9H665 355 aa7.39□□□□□ -1.23
HDGFL3-202ENST00000562702 EPHA4P54764 986 aa7.38□□□□□ -1.23
HDGFL3-202ENST00000562702 NCOA4Q13772 614 aa7.38□□□□□ -1.23
HDGFL3-202ENST00000562702 TBCELQ5QJ74 424 aa7.38□□□□□ -1.23
HDGFL3-202ENST00000562702 TNS4Q8IZW8 715 aa7.38□□□□□ -1.23
HDGFL3-202ENST00000562702 PIK3CDO00329 1044 aa7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 C7orf43Q8WVR3 580 aa7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
HDGFL3-202ENST00000562702 RGS9O75916 674 aaPredicted RBP7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 HIRAP54198 1017 aaPredicted RBP7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 TYRO3Q06418 890 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 PCSK7Q16549 785 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 NUDT8Q8WV74 236 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 HSH2DQ96JZ2 352 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 KRTAP4-12Q9BQ66 201 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 PHACTR1Q9C0D0 580 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 HCN4Q9Y3Q4 1203 aa7.36□□□□□ -1.23
HDGFL3-202ENST00000562702 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms