RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 UBE2HP62256 183 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 SMAP1Q8IYB5 467 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 NUP62CLQ9H1M0 184 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 SHPRHQ149N8 1683 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 NEMFO60524 1076 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 BRPF1P55201 1214 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 MAP3K11Q16584 847 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
CLUHP3-206ENST00000562354 TAF7LQ5H9L4 462 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 DBF4Q9UBU7 674 aaPredicted RBP10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 RNMTO43148 476 aaKnown RBP10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 SDSP20132 328 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 MEIS3Q99687 375 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 SCAND2PQ9GZW5 306 aaPredicted RBP10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 LGR6Q9HBX8 967 aa10.79□□□□□ -0.68
CLUHP3-206ENST00000562354 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 ABCC4O15439 1325 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 PLEKHM2Q8IWE5 1019 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 MAP2P11137 1827 aaKnown RBP10.78□□□□□ -0.68
CLUHP3-206ENST00000562354 G2E3Q7L622 706 aa10.77□□□□□ -0.68
CLUHP3-206ENST00000562354 KIF1BPQ96EK5 621 aa10.77□□□□□ -0.68
CLUHP3-206ENST00000562354 GTPBP4Q9BZE4 634 aaKnown RBP10.77□□□□□ -0.68
CLUHP3-206ENST00000562354 CGNQ9P2M7 1197 aaKnown RBP10.77□□□□□ -0.68
CLUHP3-206ENST00000562354 KINO60870 393 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 MYL6BP14649 208 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 CPLX2Q6PUV4 134 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 ZNF396Q96N95 335 aaPredicted RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 CCDC94Q9BW85 323 aaPredicted RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 GLRX3O76003 335 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 KRT32Q14532 448 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 SSH2Q76I76 1423 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 ADCY5O95622 1261 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 LARP1BQ659C4 914 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 CHPF2Q9P2E5 772 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 USP25Q9UHP3 1055 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 HOOK1Q9UJC3 728 aaKnown RBP10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 CFAP45Q9UL16 551 aa10.77□□□□□ -0.69
CLUHP3-206ENST00000562354 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 MNS1Q8NEH6 495 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 SETD1AO15047 1707 aaKnown RBP10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 ANXA1P04083 346 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 SYTL4Q96C24 671 aaPredicted RBP10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 KDRP35968 1356 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 HOMER1Q86YM7 354 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 LMBRD1Q9NUN5 540 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 HYPKQ9NX55 129 aa10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 ZNF335Q9H4Z2 1342 aaPredicted RBP10.76□□□□□ -0.69
CLUHP3-206ENST00000562354 PI4KAP2A4QPH2 592 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 PDE1AP54750 535 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 PI4KAP1Q8N8J0 262 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 ESYT1Q9BSJ8 1104 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 EXOC6BQ9Y2D4 811 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 CTAGE5O15320 804 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 STX6O43752 255 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 HOXB7P09629 217 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 SPC24Q8NBT2 197 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 PAXBP1Q9Y5B6 917 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 LRRFIP2Q9Y608 721 aaKnown RBP10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 ERBB3P21860 1342 aa10.75□□□□□ -0.69
CLUHP3-206ENST00000562354 SRGAP3O43295 1099 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 ZSCAN22P10073 491 aaPredicted RBP10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 RBSNQ9H1K0 784 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 SPATA32Q96LK8 384 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 CWC15Q9P013 229 aaKnown RBP10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 MON2Q7Z3U7 1717 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 CLEC17AQ6ZS10 378 aa10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
CLUHP3-206ENST00000562354 CEP85Q6P2H3 762 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 TPM1P09493 284 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 BRINP3Q76B58 766 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 CEP57L1Q8IYX8 460 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
CLUHP3-206ENST00000562354 JAKMIP1Q96N16 626 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms