RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 PDE6BP35913 854 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 HLFQ16534 295 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
SEMA4B-220ENST00000561321 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
SEMA4B-220ENST00000561321 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
SEMA4B-220ENST00000561321 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
SEMA4B-220ENST00000561321 C1QTNF8P60827 252 aa16.12■□□□□ 0.17
SEMA4B-220ENST00000561321 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
SEMA4B-220ENST00000561321 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
SEMA4B-220ENST00000561321 BABAM1Q9NWV8 329 aa16.12■□□□□ 0.17
SEMA4B-220ENST00000561321 NUP98P52948 1817 aa16.11■□□□□ 0.17
SEMA4B-220ENST00000561321 APAF1O14727 1248 aa16.11■□□□□ 0.17
SEMA4B-220ENST00000561321 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
SEMA4B-220ENST00000561321 ZBTB3Q9H5J0 574 aa16.11■□□□□ 0.17
SEMA4B-220ENST00000561321 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
SEMA4B-220ENST00000561321 ANXA1P04083 346 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 RASSF7Q02833 373 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 PDZRN3Q9UPQ7 1066 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 CACNA1SQ13698 1873 aa16.1■□□□□ 0.17
SEMA4B-220ENST00000561321 CHL1O00533 1208 aa16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 RGL2O15211 777 aa16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 TPTE2Q6XPS3 522 aa16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
SEMA4B-220ENST00000561321 SBF1O95248 1867 aa16.08■□□□□ 0.17
SEMA4B-220ENST00000561321 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
SEMA4B-220ENST00000561321 GPTP24298 496 aa16.08■□□□□ 0.16
SEMA4B-220ENST00000561321 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
SEMA4B-220ENST00000561321 ANP32CO43423 234 aa16.07■□□□□ 0.16
SEMA4B-220ENST00000561321 C21orf2O43822 256 aa16.07■□□□□ 0.16
SEMA4B-220ENST00000561321 PDIA6Q15084 440 aa16.07■□□□□ 0.16
SEMA4B-220ENST00000561321 MASTLQ96GX5 879 aa16.07■□□□□ 0.16
SEMA4B-220ENST00000561321 SRGNP10124 158 aa16.06■□□□□ 0.16
SEMA4B-220ENST00000561321 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
SEMA4B-220ENST00000561321 NUTM1Q86Y26 1132 aa16.06■□□□□ 0.16
SEMA4B-220ENST00000561321 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
SEMA4B-220ENST00000561321 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
SEMA4B-220ENST00000561321 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 AIMP1Q12904 312 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
SEMA4B-220ENST00000561321 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 NFKBIEO00221 500 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 LMNB1P20700 586 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 PRELPP51888 382 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 CHPF2Q9P2E5 772 aa16.04■□□□□ 0.16
SEMA4B-220ENST00000561321 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 TNRC6CQ9HCJ0 1690 aaKnown RBP16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 KIF3CO14782 793 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 NPR1P16066 1061 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 SUSD4Q5VX71 490 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 COPS6Q7L5N1 327 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 NMRK2Q9NPI5 230 aa16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEMA4B-220ENST00000561321 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
SEMA4B-220ENST00000561321 DUSP27Q5VZP5 1158 aa16.02■□□□□ 0.16
SEMA4B-220ENST00000561321 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
SEMA4B-220ENST00000561321 IFT57Q9NWB7 429 aa16.02■□□□□ 0.16
SEMA4B-220ENST00000561321 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
SEMA4B-220ENST00000561321 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
SEMA4B-220ENST00000561321 HOXB7P09629 217 aa16.01■□□□□ 0.15
SEMA4B-220ENST00000561321 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
SEMA4B-220ENST00000561321 GNAI1P63096 354 aa16.01■□□□□ 0.15
SEMA4B-220ENST00000561321 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
SEMA4B-220ENST00000561321 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
SEMA4B-220ENST00000561321 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
SEMA4B-220ENST00000561321 NTSR2O95665 410 aa16■□□□□ 0.15
SEMA4B-220ENST00000561321 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
SEMA4B-220ENST00000561321 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
SEMA4B-220ENST00000561321 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
SEMA4B-220ENST00000561321 CCDC93Q567U6 631 aa15.98■□□□□ 0.15
SEMA4B-220ENST00000561321 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
SEMA4B-220ENST00000561321 RPGRQ92834 1020 aaKnown RBP15.98■□□□□ 0.15
SEMA4B-220ENST00000561321 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms