RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	SIRT2	Q8IXJ6	389 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	NECTIN2	Q92692	538 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	MS4A3	Q96HJ5	214 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	FMNL2	Q96PY5	1086 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	DDX21	Q9NR30	783 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	ATG3	Q9NT62	314 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	DOT1L	Q8TEK3	1739 aa		9.29	□□□□□ -0.92
ZEB1-222	ENST00000561212	CIC	Q96RK0	1608 aa	Predicted RBP	9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	ANXA1	P04083	346 aa		9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	DDB1	Q16531	1140 aa		9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	CHD1L	Q86WJ1	897 aa		9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	SLC4A9	Q96Q91	983 aa		9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	USP21	Q9UK80	565 aa		9.28	□□□□□ -0.92
ZEB1-222	ENST00000561212	NBPF26	B4DH59	902 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	CCT4	P50991	539 aa	Known RBP	9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	NBPF14	Q5TI25	921 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	NBPF10	Q6P3W6	841 aa	Known RBP	9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	VSIG10	Q8N0Z9	540 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	NBPF15	Q8N660	670 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	HYPK	Q9NX55	129 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	ASAP1	Q9ULH1	1129 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	ERBB4	Q15303	1308 aa		9.27	□□□□□ -0.93
ZEB1-222	ENST00000561212	FKBP5	Q13451	457 aa	Predicted RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	BEND3	Q5T5X7	828 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	TTC5	Q8N0Z6	440 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	ANKRD44	Q8N8A2	993 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	MEIS3	Q99687	375 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	USP44	Q9H0E7	712 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	C1orf115	Q9H7X2	142 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	UPF2	Q9HAU5	1272 aa	Known RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	TMOD3	Q9NYL9	352 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	ZNF831	Q5JPB2	1677 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	TJP1	Q07157	1748 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	PI4KAP2	A4QPH2	592 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	PRIM1	P49642	420 aa	Known RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	FAM98C	Q17RN3	349 aa	Known RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	PI4KAP1	Q8N8J0	262 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	GJD4	Q96KN9	370 aa	Predicted RBP	9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	DCTPP1	Q9H773	170 aa		9.26	□□□□□ -0.93
ZEB1-222	ENST00000561212	AFF2	P51816	1311 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	SEC24B	O95487	1268 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	BMP2KL	Q5H9B9	411 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	ASTL	Q6HA08	431 aa	Predicted RBP	9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	KSR2	Q6VAB6	950 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	DNAAF4	Q8WXU2	420 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	TBC1D32	Q96NH3	1257 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	LNPK	Q9C0E8	428 aa		9.25	□□□□□ -0.93
ZEB1-222	ENST00000561212	RREB1	Q92766	1687 aa		9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	PTCD1	O75127	700 aa	Known RBP	9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	ANKRD45	Q5TZF3	282 aa		9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	CEP85	Q6P2H3	762 aa		9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	NUP188	Q5SRE5	1749 aa		9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	UTY	O14607	1347 aa		9.24	□□□□□ -0.93
ZEB1-222	ENST00000561212	SBF2	Q86WG5	1849 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	KAT6B	Q8WYB5	2073 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	ARFGEF2	Q9Y6D5	1785 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	IGKV5-2	P06315	115 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	COPS6	Q7L5N1	327 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	CDAN1	Q8IWY9	1227 aa		9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	DAXX	Q9UER7	740 aa	Predicted RBP	9.23	□□□□□ -0.93
ZEB1-222	ENST00000561212	ATMIN	O43313	823 aa	Predicted RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	KCNQ2	O43526	872 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	HMMR	O75330	724 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	A1BG	P04217	495 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	CYP19A1	P11511	503 aa	Predicted RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	SLC4A10	Q6U841	1118 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	DNAJC10	Q8IXB1	793 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	XAGE3	Q8WTP9	111 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	TEX13A	Q9BXU3	409 aa	Predicted RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	TRPC5	Q9UL62	973 aa	Predicted RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	MAP3K2	Q9Y2U5	619 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	CCDC9	Q9Y3X0	531 aa	Known RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	NHS	Q6T4R5	1651 aa		9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	MYH14	Q7Z406	1995 aa	Known RBP	9.22	□□□□□ -0.93
ZEB1-222	ENST00000561212	ALDH1L1	O75891	902 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	GNAI2	P04899	355 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	GNAI3	P08754	354 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	C7	P10643	843 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	PIP4K2A	P48426	406 aa	Predicted RBP	9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	ANKRD13D	Q6ZTN6	518 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	PTF1A	Q7RTS3	328 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	LINS1	Q8NG48	757 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	SLC39A7	Q92504	469 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	SRCIN1	Q9C0H9	1055 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	METRN	Q9UJH8	293 aa		9.21	□□□□□ -0.93
ZEB1-222	ENST00000561212	COL5A3	P25940	1745 aa	Predicted RBP	9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	EP400	Q96L91	3159 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	NBPF7	P0C2Y1	421 aa	Predicted RBP	9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	MYL6B	P14649	208 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	BECN1	Q14457	450 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	PLCD3	Q8N3E9	789 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	KIF12	Q96FN5	646 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	KAZALD1	Q96I82	304 aa		9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	METTL22	Q9BUU2	404 aa	Predicted RBP	9.21	□□□□□ -0.94
ZEB1-222	ENST00000561212	BTAF1	O14981	1849 aa		9.2	□□□□□ -0.94
ZEB1-222	ENST00000561212	EIF5B	O60841	1220 aa	Known RBP	9.2	□□□□□ -0.94
ZEB1-222	ENST00000561212	MTX1	Q13505	466 aa		9.2	□□□□□ -0.94
ZEB1-222	ENST00000561212	TTLL7	Q6ZT98	887 aa		9.2	□□□□□ -0.94
ZEB1-222	ENST00000561212	PLBD2	Q8NHP8	589 aa		9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms