RNA–Protein interactions for RNA: ENST00000560335.5

NUMB-232, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-232ENST00000560335 RNF39Q9H2S5 420 aa8.66□□□□□ -1.02
NUMB-232ENST00000560335 QTRT2Q9H974 415 aaKnown RBP8.66□□□□□ -1.02
NUMB-232ENST00000560335 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
NUMB-232ENST00000560335 CHPF2Q9P2E5 772 aa8.66□□□□□ -1.02
NUMB-232ENST00000560335 PI4KAP2A4QPH2 592 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 APBB1O00213 710 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 HIP1O00291 1037 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 SRGAP3O43295 1099 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 SURF6O75683 361 aaKnown RBP8.65□□□□□ -1.02
NUMB-232ENST00000560335 PI4KAP1Q8N8J0 262 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 LINS1Q8NG48 757 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 RAPGEF4Q8WZA2 1011 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 DDX21Q9NR30 783 aaKnown RBP eCLIP8.65□□□□□ -1.02
NUMB-232ENST00000560335 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 GLI3P10071 1580 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 ATRNO75882 1429 aa8.65□□□□□ -1.02
NUMB-232ENST00000560335 ADCY9O60503 1353 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 COL15A1P39059 1388 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 CD2BP2O95400 341 aaKnown RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 EIF2S2P20042 333 aaKnown RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 CUL4AQ13619 759 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 ZNF772Q68DY9 489 aaPredicted RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 TICAM2Q86XR7 235 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 CLASRPQ8N2M8 674 aaKnown RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 PHAXQ9H814 394 aaKnown RBP8.65□□□□□ -1.03
NUMB-232ENST00000560335 LGR6Q9HBX8 967 aa8.65□□□□□ -1.03
NUMB-232ENST00000560335 MRC1P22897 1456 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 BAG4O95429 457 aaKnown RBP8.64□□□□□ -1.03
NUMB-232ENST00000560335 TATP17735 454 aaPredicted RBP8.64□□□□□ -1.03
NUMB-232ENST00000560335 EVA1CP58658 441 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 VPS72Q15906 364 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
NUMB-232ENST00000560335 NLRP2Q9NX02 1062 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 C9orf78Q9NZ63 289 aaPredicted RBP8.64□□□□□ -1.03
NUMB-232ENST00000560335 MEGF6O75095 1541 aa8.64□□□□□ -1.03
NUMB-232ENST00000560335 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 RAD50Q92878 1312 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 HSPA4P34932 840 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 MPRIPQ6WCQ1 1025 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 KIAA1211Q6ZU35 1233 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 PI4K2BQ8TCG2 481 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 RILPL2Q969X0 211 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
NUMB-232ENST00000560335 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
NUMB-232ENST00000560335 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
NUMB-232ENST00000560335 SPATA31A5Q5VU36 1347 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 SPATA31A7Q8IWB4 1347 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 WDR17Q8IZU2 1322 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 SGSM2O43147 1006 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 MBD3O95983 291 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 NEK4P51957 841 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
NUMB-232ENST00000560335 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 GRPEL1Q9HAV7 217 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 ECHDC1Q9NTX5 307 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 MAP3K2Q9Y2U5 619 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
NUMB-232ENST00000560335 BRWD3Q6RI45 1802 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 SPATA31A1Q5TZJ5 1347 aa8.62□□□□□ -1.03
NUMB-232ENST00000560335 GRM8O00222 908 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 XRCC6P12956 609 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUMB-232ENST00000560335 RXRBP28702 533 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 ZNF445P59923 1031 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 OS9Q13438 667 aaPredicted RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 FAM98CQ17RN3 349 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 TMX3Q96JJ7 454 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 PARP4Q9UKK3 1724 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 RFX7Q2KHR2 1363 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 SCN11AQ9UI33 1791 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 IFIT2P09913 472 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 PHKG2P15735 406 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 SSFA2P28290 1259 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
NUMB-232ENST00000560335 TM6SF1Q9BZW5 370 aa8.61□□□□□ -1.03
NUMB-232ENST00000560335 WNK3Q9BYP7 1800 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 BRD1O95696 1058 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.034e-6■■■■□ 21.1
NUMB-232ENST00000560335 TTC5Q8N0Z6 440 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
NUMB-232ENST00000560335 SNRKQ9NRH2 765 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 DIAPH3Q9NSV4 1193 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.6□□□□□ -1.03
NUMB-232ENST00000560335 ATP6V1DQ9Y5K8 247 aa8.6□□□□□ -1.03
NUMB-232ENST00000560335 PKD1L3Q7Z443 1732 aa8.59□□□□□ -1.03
NUMB-232ENST00000560335 WDR33Q9C0J8 1336 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms