RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
USP3-213ENST00000559711 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
USP3-213ENST00000559711 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 SMARCA5O60264 1052 aaPredicted RBP15.73■□□□□ 0.11
USP3-213ENST00000559711 KAZALD1Q96I82 304 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 USP21Q9UK80 565 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 SEC24BO95487 1268 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 SUCLG2Q96I99 432 aa15.73■□□□□ 0.11
USP3-213ENST00000559711 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
USP3-213ENST00000559711 COL15A1P39059 1388 aa15.72■□□□□ 0.11
USP3-213ENST00000559711 APBB1O00213 710 aa15.72■□□□□ 0.11
USP3-213ENST00000559711 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
USP3-213ENST00000559711 ITGB4P16144 1822 aa15.71■□□□□ 0.11
USP3-213ENST00000559711 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.11
USP3-213ENST00000559711 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
USP3-213ENST00000559711 OSBPL3Q9H4L5 887 aa15.71■□□□□ 0.11
USP3-213ENST00000559711 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
USP3-213ENST00000559711 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
USP3-213ENST00000559711 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
USP3-213ENST00000559711 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
USP3-213ENST00000559711 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
USP3-213ENST00000559711 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
USP3-213ENST00000559711 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
USP3-213ENST00000559711 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
USP3-213ENST00000559711 GSPT1P15170 499 aaKnown RBP15.69■□□□□ 0.1
USP3-213ENST00000559711 CASP7P55210 303 aa15.69■□□□□ 0.1
USP3-213ENST00000559711 H7C1W4 665 aa15.68■□□□□ 0.1
USP3-213ENST00000559711 TRIM28Q13263 835 aaKnown RBP15.68■□□□□ 0.1
USP3-213ENST00000559711 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
USP3-213ENST00000559711 KIF1BPQ96EK5 621 aa15.68■□□□□ 0.1
USP3-213ENST00000559711 A0A087WZG4 1122 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 PDE1AP54750 535 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 MEX3CQ5U5Q3 659 aaKnown RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 CWC25Q9NXE8 425 aaPredicted RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 STAP2Q9UGK3 403 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 DOT1LQ8TEK3 1739 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 MSH5O43196 834 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 TCIRG1Q13488 830 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
USP3-213ENST00000559711 GJD4Q96KN9 370 aaPredicted RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
USP3-213ENST00000559711 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.66■□□□□ 0.1
USP3-213ENST00000559711 AFF2P51816 1311 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 LOC102724428A0A0B4J2F2 783 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 KCNQ2O43526 872 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 ONECUT3O60422 494 aaPredicted RBP15.66■□□□□ 0.1
USP3-213ENST00000559711 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
USP3-213ENST00000559711 SIK1P57059 783 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 KIF6Q6ZMV9 814 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
USP3-213ENST00000559711 ARFGEF2Q9Y6D5 1785 aa15.65■□□□□ 0.1
USP3-213ENST00000559711 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
USP3-213ENST00000559711 MX1P20591 662 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 ERC1Q8IUD2 1116 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 TBC1D32Q96NH3 1257 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 PALLDQ8WX93 1383 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 AOX1Q06278 1338 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 ATRNO75882 1429 aa15.64■□□□□ 0.09
USP3-213ENST00000559711 CDC45O75419 566 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 ATP6V1AP38606 617 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 INTS5Q6P9B9 1019 aaKnown RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 TBC1D9Q6ZT07 1266 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 DDRGK1Q96HY6 314 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 BCL11AQ9H165 835 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 IL1RAPL2Q9NP60 686 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 A0A0G2JS52 829 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 ERVV-1B6SEH8 477 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 SDSP20132 328 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
USP3-213ENST00000559711 THSD7AQ9UPZ6 1657 aa15.63■□□□□ 0.09
USP3-213ENST00000559711 NUP188Q5SRE5 1749 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 RFX5P48382 616 aaPredicted RBP15.62■□□□□ 0.09
USP3-213ENST00000559711 FOXO4P98177 505 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 ITPK1Q13572 414 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 COPRSQ9NQ92 184 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 CCDC87Q9NVE4 849 aa15.62■□□□□ 0.09
USP3-213ENST00000559711 TJP1Q07157 1748 aa15.61■□□□□ 0.09
USP3-213ENST00000559711 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
USP3-213ENST00000559711 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
USP3-213ENST00000559711 MYT1Q01538 1121 aa15.61■□□□□ 0.09
USP3-213ENST00000559711 G3BP1Q13283 466 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP3-213ENST00000559711 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
USP3-213ENST00000559711 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
USP3-213ENST00000559711 HLFQ16534 295 aa15.6■□□□□ 0.09
USP3-213ENST00000559711 USP42Q9H9J4 1324 aaKnown RBP15.6■□□□□ 0.09
USP3-213ENST00000559711 SASH1O94885 1247 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms