RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
SMAD3-210ENST00000559092 MYL6BP14649 208 aa22.99■■□□□ 1.27
SMAD3-210ENST00000559092 HLFQ16534 295 aa22.99■■□□□ 1.27
SMAD3-210ENST00000559092 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
SMAD3-210ENST00000559092 MAP3K15Q6ZN16 1313 aa22.99■■□□□ 1.27
SMAD3-210ENST00000559092 APAF1O14727 1248 aa22.98■■□□□ 1.27
SMAD3-210ENST00000559092 CFAP44Q96MT7 982 aa22.98■■□□□ 1.27
SMAD3-210ENST00000559092 GPBP1L1Q9HC44 474 aaPredicted RBP22.98■■□□□ 1.27
SMAD3-210ENST00000559092 ANP32CO43423 234 aa22.97■■□□□ 1.27
SMAD3-210ENST00000559092 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
SMAD3-210ENST00000559092 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
SMAD3-210ENST00000559092 PDIA6Q15084 440 aa22.97■■□□□ 1.27
SMAD3-210ENST00000559092 LAS1LQ9Y4W2 734 aaKnown RBP22.97■■□□□ 1.27
SMAD3-210ENST00000559092 STYK1Q6J9G0 422 aa22.96■■□□□ 1.27
SMAD3-210ENST00000559092 TTLL7Q6ZT98 887 aa22.96■■□□□ 1.27
SMAD3-210ENST00000559092 CCDC24Q8N4L8 307 aa22.96■■□□□ 1.27
SMAD3-210ENST00000559092 ZNF622Q969S3 477 aaKnown RBP eCLIP22.96■■□□□ 1.27
SMAD3-210ENST00000559092 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
SMAD3-210ENST00000559092 HOXB7P09629 217 aa22.95■■□□□ 1.26
SMAD3-210ENST00000559092 SRGNP10124 158 aa22.95■■□□□ 1.26
SMAD3-210ENST00000559092 C1QTNF8P60827 252 aa22.95■■□□□ 1.26
SMAD3-210ENST00000559092 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.26
SMAD3-210ENST00000559092 CNKSR1Q969H4 720 aa22.95■■□□□ 1.26
SMAD3-210ENST00000559092 BRCA1P38398 1863 aaKnown RBP22.94■■□□□ 1.26
SMAD3-210ENST00000559092 KLRG2A4D1S0 409 aaPredicted RBP22.94■■□□□ 1.26
SMAD3-210ENST00000559092 C9orf131Q5VYM1 1079 aa22.94■■□□□ 1.26
SMAD3-210ENST00000559092 MASTLQ96GX5 879 aa22.94■■□□□ 1.26
SMAD3-210ENST00000559092 NYXQ9GZU5 481 aa22.94■■□□□ 1.26
SMAD3-210ENST00000559092 ZNF853P0CG23 659 aa22.93■■□□□ 1.26
SMAD3-210ENST00000559092 CCDC184Q52MB2 194 aa22.93■■□□□ 1.26
SMAD3-210ENST00000559092 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
SMAD3-210ENST00000559092 BCORQ6W2J9 1755 aa22.92■■□□□ 1.26
SMAD3-210ENST00000559092 GTF2E1P29083 439 aaPredicted RBP22.92■■□□□ 1.26
SMAD3-210ENST00000559092 GIGYF2Q6Y7W6 1299 aaKnown RBP22.92■■□□□ 1.26
SMAD3-210ENST00000559092 ZBTB3Q9H5J0 574 aa22.92■■□□□ 1.26
SMAD3-210ENST00000559092 DDX21Q9NR30 783 aaKnown RBP eCLIP22.92■■□□□ 1.26
SMAD3-210ENST00000559092 IFT57Q9NWB7 429 aa22.92■■□□□ 1.26
SMAD3-210ENST00000559092 GNAI1P63096 354 aa22.91■■□□□ 1.26
SMAD3-210ENST00000559092 ZNF34Q8IZ26 560 aa22.91■■□□□ 1.26
SMAD3-210ENST00000559092 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
SMAD3-210ENST00000559092 NPR1P16066 1061 aa22.9■■□□□ 1.26
SMAD3-210ENST00000559092 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
SMAD3-210ENST00000559092 PROSER3Q2NL68 480 aa22.9■■□□□ 1.26
SMAD3-210ENST00000559092 MBIPQ9NS73 344 aa22.9■■□□□ 1.26
SMAD3-210ENST00000559092 ARFGEF1Q9Y6D6 1849 aa22.89■■□□□ 1.26
SMAD3-210ENST00000559092 SOGA3Q5TF21 947 aa22.89■■□□□ 1.25
SMAD3-210ENST00000559092 RNF181Q9P0P0 153 aa22.89■■□□□ 1.25
SMAD3-210ENST00000559092 FAM177BA6PVY3 158 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 LMNB1P20700 586 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
SMAD3-210ENST00000559092 PARP10Q53GL7 1025 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 HDGFL1Q5TGJ6 251 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 MRS2Q9HD23 443 aa22.88■■□□□ 1.25
SMAD3-210ENST00000559092 IBTKQ9P2D0 1353 aaPredicted RBP22.88■■□□□ 1.25
SMAD3-210ENST00000559092 ZC3H4Q9UPT8 1303 aaKnown RBP22.87■■□□□ 1.25
SMAD3-210ENST00000559092 C21orf2O43822 256 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 ANXA1P04083 346 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 CCDC27Q2M243 656 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 DUSP27Q5VZP5 1158 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 NECTIN2Q92692 538 aa22.87■■□□□ 1.25
SMAD3-210ENST00000559092 GPTP24298 496 aa22.86■■□□□ 1.25
SMAD3-210ENST00000559092 HSP90AB3PQ58FF7 597 aa22.86■■□□□ 1.25
SMAD3-210ENST00000559092 SUSD4Q5VX71 490 aa22.86■■□□□ 1.25
SMAD3-210ENST00000559092 PRPF40BQ6NWY9 871 aaKnown RBP22.86■■□□□ 1.25
SMAD3-210ENST00000559092 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
SMAD3-210ENST00000559092 DBF4Q9UBU7 674 aaPredicted RBP22.86■■□□□ 1.25
SMAD3-210ENST00000559092 UBN2Q6ZU65 1347 aa22.85■■□□□ 1.25
SMAD3-210ENST00000559092 NFKBIEO00221 500 aa22.85■■□□□ 1.25
SMAD3-210ENST00000559092 CHMP4AQ9BY43 222 aa22.85■■□□□ 1.25
SMAD3-210ENST00000559092 CHPF2Q9P2E5 772 aa22.85■■□□□ 1.25
SMAD3-210ENST00000559092 DLEC1Q9Y238 1755 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 ALDH1B1P30837 517 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 RASSF7Q02833 373 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 CRY2Q49AN0 593 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 ERFEQ4G0M1 354 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 C7orf43Q8WVR3 580 aa22.84■■□□□ 1.25
SMAD3-210ENST00000559092 LTBP3Q9NS15 1303 aa22.83■■□□□ 1.25
SMAD3-210ENST00000559092 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.25
SMAD3-210ENST00000559092 AIMP1Q12904 312 aaKnown RBP22.83■■□□□ 1.25
SMAD3-210ENST00000559092 NUTM1Q86Y26 1132 aa22.83■■□□□ 1.25
SMAD3-210ENST00000559092 HYPKQ9NX55 129 aa22.83■■□□□ 1.25
SMAD3-210ENST00000559092 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
SMAD3-210ENST00000559092 KIF3CO14782 793 aa22.82■■□□□ 1.24
SMAD3-210ENST00000559092 NTSR2O95665 410 aa22.82■■□□□ 1.24
SMAD3-210ENST00000559092 UTP14AQ9BVJ6 771 aaKnown RBP22.82■■□□□ 1.24
SMAD3-210ENST00000559092 ZNF219Q9P2Y4 722 aaPredicted RBP22.82■■□□□ 1.24
SMAD3-210ENST00000559092 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
SMAD3-210ENST00000559092 PRELPP51888 382 aa22.81■■□□□ 1.24
SMAD3-210ENST00000559092 TCIRG1Q13488 830 aa22.81■■□□□ 1.24
SMAD3-210ENST00000559092 SLC10A5Q5PT55 438 aa22.81■■□□□ 1.24
SMAD3-210ENST00000559092 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
SMAD3-210ENST00000559092 RIC1Q4ADV7 1423 aa22.81■■□□□ 1.24
SMAD3-210ENST00000559092 HOXA10P31260 410 aaPredicted RBP22.8■■□□□ 1.24
SMAD3-210ENST00000559092 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
SMAD3-210ENST00000559092 PLBD2Q8NHP8 589 aa22.8■■□□□ 1.24
SMAD3-210ENST00000559092 TAOK3Q9H2K8 898 aa22.8■■□□□ 1.24
SMAD3-210ENST00000559092 ABCC12Q96J65 1359 aa22.79■■□□□ 1.24
SMAD3-210ENST00000559092 CCDC93Q567U6 631 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms