RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
TPM1-215ENST00000558868 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
TPM1-215ENST00000558868 MYD88Q99836 296 aa17.12■□□□□ 0.33
TPM1-215ENST00000558868 EP400Q96L91 3159 aa17.12■□□□□ 0.33
TPM1-215ENST00000558868 NBPF7P0C2Y1 421 aaPredicted RBP17.11■□□□□ 0.33
TPM1-215ENST00000558868 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
TPM1-215ENST00000558868 TRPC5Q9UL62 973 aaPredicted RBP17.11■□□□□ 0.33
TPM1-215ENST00000558868 AFF2P51816 1311 aa17.11■□□□□ 0.33
TPM1-215ENST00000558868 A0A0G2JS52 829 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 IGKV5-2P06315 115 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
TPM1-215ENST00000558868 MYT1Q01538 1121 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 MTX1Q13505 466 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 POLA2Q14181 598 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 GCKRQ14397 625 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
TPM1-215ENST00000558868 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
TPM1-215ENST00000558868 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
TPM1-215ENST00000558868 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 ACSBG1Q96GR2 724 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
TPM1-215ENST00000558868 ATRNO75882 1429 aa17.08■□□□□ 0.32
TPM1-215ENST00000558868 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.32
TPM1-215ENST00000558868 CYP19A1P11511 503 aaPredicted RBP17.08■□□□□ 0.32
TPM1-215ENST00000558868 NPM2Q86SE8 214 aaKnown RBP17.08■□□□□ 0.32
TPM1-215ENST00000558868 COL15A1P39059 1388 aa17.07■□□□□ 0.32
TPM1-215ENST00000558868 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
TPM1-215ENST00000558868 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
TPM1-215ENST00000558868 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
TPM1-215ENST00000558868 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
TPM1-215ENST00000558868 BMP2KLQ5H9B9 411 aa17.06■□□□□ 0.32
TPM1-215ENST00000558868 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
TPM1-215ENST00000558868 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 YY1P25490 414 aa17.05■□□□□ 0.32
TPM1-215ENST00000558868 IL6STP40189 918 aaPredicted RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
TPM1-215ENST00000558868 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
TPM1-215ENST00000558868 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
TPM1-215ENST00000558868 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
TPM1-215ENST00000558868 TJP1Q07157 1748 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
TPM1-215ENST00000558868 ATP6V1AP38606 617 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 SIK1P57059 783 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
TPM1-215ENST00000558868 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
TPM1-215ENST00000558868 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 A0A087WZG4 1122 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 APBB1O00213 710 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
TPM1-215ENST00000558868 TCIRG1Q13488 830 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 KIF1BPQ96EK5 621 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 ZBTB3Q9H5J0 574 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
TPM1-215ENST00000558868 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
TPM1-215ENST00000558868 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
TPM1-215ENST00000558868 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
TPM1-215ENST00000558868 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
TPM1-215ENST00000558868 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
TPM1-215ENST00000558868 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
TPM1-215ENST00000558868 H7C1W4 665 aa17.01■□□□□ 0.31
TPM1-215ENST00000558868 SMARCA5O60264 1052 aaPredicted RBP17.01■□□□□ 0.31
TPM1-215ENST00000558868 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
TPM1-215ENST00000558868 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
TPM1-215ENST00000558868 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
TPM1-215ENST00000558868 KCNQ2O43526 872 aa17■□□□□ 0.31
TPM1-215ENST00000558868 OS9Q13438 667 aaPredicted RBP17■□□□□ 0.31
TPM1-215ENST00000558868 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
TPM1-215ENST00000558868 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
TPM1-215ENST00000558868 ZBTB1Q9Y2K1 713 aa17■□□□□ 0.31
TPM1-215ENST00000558868 TTC22Q5TAA0 569 aa16.99■□□□□ 0.31
TPM1-215ENST00000558868 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
TPM1-215ENST00000558868 KAZALD1Q96I82 304 aa16.99■□□□□ 0.31
TPM1-215ENST00000558868 ARXQ96QS3 562 aa16.99■□□□□ 0.31
TPM1-215ENST00000558868 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
TPM1-215ENST00000558868 AOX1Q06278 1338 aa16.98■□□□□ 0.31
TPM1-215ENST00000558868 RREB1Q92766 1687 aa16.98■□□□□ 0.31
TPM1-215ENST00000558868 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 CASP7P55210 303 aa16.98■□□□□ 0.31
TPM1-215ENST00000558868 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
TPM1-215ENST00000558868 RABL6Q3YEC7 729 aaPredicted RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
TPM1-215ENST00000558868 C16orf71Q8IYS4 520 aaPredicted RBP16.98■□□□□ 0.31
TPM1-215ENST00000558868 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
TPM1-215ENST00000558868 PCCAP05165 728 aaPredicted RBP16.96■□□□□ 0.31
TPM1-215ENST00000558868 MX1P20591 662 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms