RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 XAGE3Q8WTP9 111 aa31.27■■■□□ 2.6
ZEB1-214ENST00000558863 COL24A1Q17RW2 1714 aa31.26■■■□□ 2.59
ZEB1-214ENST00000558863 SLC4A2P04920 1241 aa31.26■■■□□ 2.59
ZEB1-214ENST00000558863 ALDH1L2Q3SY69 923 aa31.25■■■□□ 2.59
ZEB1-214ENST00000558863 TTLL7Q6ZT98 887 aa31.25■■■□□ 2.59
ZEB1-214ENST00000558863 AIMP1Q12904 312 aaKnown RBP31.24■■■□□ 2.59
ZEB1-214ENST00000558863 DDX58O95786 925 aaKnown RBP31.23■■■□□ 2.59
ZEB1-214ENST00000558863 POLD1P28340 1107 aa31.23■■■□□ 2.59
ZEB1-214ENST00000558863 ATF5Q9Y2D1 282 aaPredicted RBP31.23■■■□□ 2.59
ZEB1-214ENST00000558863 FKBP8Q14318 412 aa31.22■■■□□ 2.59
ZEB1-214ENST00000558863 MSL1Q68DK7 614 aa31.22■■■□□ 2.59
ZEB1-214ENST00000558863 BCL2L12Q9HB09 334 aa31.22■■■□□ 2.59
ZEB1-214ENST00000558863 TCERG1O14776 1098 aaKnown RBP31.21■■■□□ 2.59
ZEB1-214ENST00000558863 PLBD2Q8NHP8 589 aa31.21■■■□□ 2.59
ZEB1-214ENST00000558863 ANKRD13DQ6ZTN6 518 aa31.2■■■□□ 2.59
ZEB1-214ENST00000558863 PHAXQ9H814 394 aaKnown RBP31.2■■■□□ 2.59
ZEB1-214ENST00000558863 GIGYF2Q6Y7W6 1299 aaKnown RBP31.19■■■□□ 2.58
ZEB1-214ENST00000558863 ZBTB3Q9H5J0 574 aa31.19■■■□□ 2.58
ZEB1-214ENST00000558863 HSP90AB3PQ58FF7 597 aa31.18■■■□□ 2.58
ZEB1-214ENST00000558863 PTGER2P43116 358 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 FLIIQ13045 1269 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 SGIP1Q9BQI5 828 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 LRP5O75197 1615 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 MMP10P09238 476 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 TM4SF1P30408 202 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 SSH1Q8WYL5 1049 aa31.17■■■□□ 2.58
ZEB1-214ENST00000558863 ATP10DQ9P241 1426 aa31.16■■■□□ 2.58
ZEB1-214ENST00000558863 HLFQ16534 295 aa31.16■■■□□ 2.58
ZEB1-214ENST00000558863 RIC3Q7Z5B4 369 aa31.16■■■□□ 2.58
ZEB1-214ENST00000558863 PARP3Q9Y6F1 533 aa31.16■■■□□ 2.58
ZEB1-214ENST00000558863 NUP98P52948 1817 aa31.15■■■□□ 2.58
ZEB1-214ENST00000558863 NFIXQ14938 502 aa31.15■■■□□ 2.58
ZEB1-214ENST00000558863 TBC1D9BQ66K14 1250 aa31.15■■■□□ 2.58
ZEB1-214ENST00000558863 MRPL50Q8N5N7 158 aaKnown RBP31.15■■■□□ 2.58
ZEB1-214ENST00000558863 SETDB2Q96T68 719 aa31.15■■■□□ 2.58
ZEB1-214ENST00000558863 SMC4Q9NTJ3 1288 aa31.15■■■□□ 2.58
ZEB1-214ENST00000558863 RARSP54136 660 aaKnown RBP31.14■■■□□ 2.58
ZEB1-214ENST00000558863 BRPF1P55201 1214 aaPredicted RBP31.14■■■□□ 2.58
ZEB1-214ENST00000558863 G2E3Q7L622 706 aa31.14■■■□□ 2.58
ZEB1-214ENST00000558863 CARMIL3Q8ND23 1372 aa31.13■■■□□ 2.57
ZEB1-214ENST00000558863 KSR2Q6VAB6 950 aa31.13■■■□□ 2.57
ZEB1-214ENST00000558863 FKBP5Q13451 457 aaPredicted RBP31.12■■■□□ 2.57
ZEB1-214ENST00000558863 NIP7Q9Y221 180 aaKnown RBP eCLIP31.11■■■□□ 2.57
ZEB1-214ENST00000558863 PTPRCP08575 1304 aa31.1■■■□□ 2.57
ZEB1-214ENST00000558863 POLRMTO00411 1230 aaKnown RBP31.1■■■□□ 2.57
ZEB1-214ENST00000558863 TCIRG1Q13488 830 aa31.1■■■□□ 2.57
ZEB1-214ENST00000558863 BICDL1Q6ZP65 573 aa31.1■■■□□ 2.57
ZEB1-214ENST00000558863 ARFGEF2Q9Y6D5 1785 aa31.1■■■□□ 2.57
ZEB1-214ENST00000558863 PI4KAP2A4QPH2 592 aa31.09■■■□□ 2.57
ZEB1-214ENST00000558863 PARP10Q53GL7 1025 aa31.09■■■□□ 2.57
ZEB1-214ENST00000558863 PI4KAP1Q8N8J0 262 aa31.09■■■□□ 2.57
ZEB1-214ENST00000558863 KIF16BQ96L93 1317 aa31.09■■■□□ 2.57
ZEB1-214ENST00000558863 DDR1Q08345 913 aa31.08■■■□□ 2.57
ZEB1-214ENST00000558863 ZNF34Q8IZ26 560 aa31.08■■■□□ 2.57
ZEB1-214ENST00000558863 BCL2L13Q9BXK5 485 aa31.08■■■□□ 2.57
ZEB1-214ENST00000558863 ANKRD36CQ5JPF3 1778 aa31.08■■■□□ 2.57
ZEB1-214ENST00000558863 METTL22Q9BUU2 404 aaPredicted RBP31.07■■■□□ 2.56
ZEB1-214ENST00000558863 PPP1R1BQ9UD71 204 aaPredicted RBP31.07■■■□□ 2.56
ZEB1-214ENST00000558863 MAP3K2Q9Y2U5 619 aa31.07■■■□□ 2.56
ZEB1-214ENST00000558863 ADCY9O60503 1353 aa31.07■■■□□ 2.56
ZEB1-214ENST00000558863 SERPINB2P05120 415 aa31.06■■■□□ 2.56
ZEB1-214ENST00000558863 IBTKQ9P2D0 1353 aaPredicted RBP31.06■■■□□ 2.56
ZEB1-214ENST00000558863 NEXNQ0ZGT2 675 aa31.05■■■□□ 2.56
ZEB1-214ENST00000558863 TRIM28Q13263 835 aaKnown RBP31.05■■■□□ 2.56
ZEB1-214ENST00000558863 DNAAF4Q8WXU2 420 aa31.05■■■□□ 2.56
ZEB1-214ENST00000558863 NYXQ9GZU5 481 aa31.05■■■□□ 2.56
ZEB1-214ENST00000558863 GPTP24298 496 aa31.04■■■□□ 2.56
ZEB1-214ENST00000558863 PPP1R42Q7Z4L9 355 aa31.04■■■□□ 2.56
ZEB1-214ENST00000558863 NBPF5PQ86XG9 351 aaPredicted RBP31.04■■■□□ 2.56
ZEB1-214ENST00000558863 NRXN2Q9P2S2 1712 aa31.03■■■□□ 2.56
ZEB1-214ENST00000558863 TPTE2Q6XPS3 522 aa31.03■■■□□ 2.56
ZEB1-214ENST00000558863 ISCA1Q9BUE6 129 aa31.03■■■□□ 2.56
ZEB1-214ENST00000558863 IPO8O15397 1037 aaKnown RBP31.02■■■□□ 2.56
ZEB1-214ENST00000558863 RNF123Q5XPI4 1314 aa31.02■■■□□ 2.56
ZEB1-214ENST00000558863 UBN2Q6ZU65 1347 aa31.02■■■□□ 2.56
ZEB1-214ENST00000558863 NPHP1O15259 732 aa31.01■■■□□ 2.55
ZEB1-214ENST00000558863 NLRP10Q86W26 655 aa31.01■■■□□ 2.55
ZEB1-214ENST00000558863 CNBD1Q8NA66 436 aa31.01■■■□□ 2.55
ZEB1-214ENST00000558863 ARHGAP45Q92619 1136 aa31.01■■■□□ 2.55
ZEB1-214ENST00000558863 MYD88Q99836 296 aa31.01■■■□□ 2.55
ZEB1-214ENST00000558863 CCDC191Q8NCU4 936 aa31■■■□□ 2.55
ZEB1-214ENST00000558863 AFDNP55196 1824 aaKnown RBP31■■■□□ 2.55
ZEB1-214ENST00000558863 API5Q9BZZ5 524 aaKnown RBP30.99■■■□□ 2.55
ZEB1-214ENST00000558863 RCAN3Q9UKA8 241 aa30.99■■■□□ 2.55
ZEB1-214ENST00000558863 NOB1Q9ULX3 412 aaKnown RBP30.99■■■□□ 2.55
ZEB1-214ENST00000558863 CD2APQ9Y5K6 639 aa30.99■■■□□ 2.55
ZEB1-214ENST00000558863 BCAR3O75815 825 aa30.98■■■□□ 2.55
ZEB1-214ENST00000558863 ST5P78524 1137 aa30.98■■■□□ 2.55
ZEB1-214ENST00000558863 UTP14AQ9BVJ6 771 aaKnown RBP30.98■■■□□ 2.55
ZEB1-214ENST00000558863 C10orf71Q711Q0 1435 aa30.98■■■□□ 2.55
ZEB1-214ENST00000558863 ATP5J2-PTCD1G3V325 749 aa30.97■■■□□ 2.55
ZEB1-214ENST00000558863 GTF2E1P29083 439 aaPredicted RBP30.97■■■□□ 2.55
ZEB1-214ENST00000558863 SUSD4Q5VX71 490 aa30.97■■■□□ 2.55
ZEB1-214ENST00000558863 LINS1Q8NG48 757 aa30.97■■■□□ 2.55
ZEB1-214ENST00000558863 F6X3S4 739 aa30.96■■■□□ 2.55
ZEB1-214ENST00000558863 PRR5LQ6MZQ0 368 aa30.96■■■□□ 2.55
ZEB1-214ENST00000558863 CWC25Q9NXE8 425 aaPredicted RBP30.96■■■□□ 2.55
ZEB1-214ENST00000558863 NTSR2O95665 410 aa30.95■■■□□ 2.55
ZEB1-214ENST00000558863 PXDNLA1KZ92 1463 aa30.95■■■□□ 2.54
ZEB1-214ENST00000558863 KIF13BQ9NQT8 1826 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms