RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 C10orf71Q711Q0 1435 aa20.52■□□□□ 0.87
RABGGTA-206ENST00000558649 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
RABGGTA-206ENST00000558649 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
RABGGTA-206ENST00000558649 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
RABGGTA-206ENST00000558649 TSPYL6Q8N831 410 aa20.5■□□□□ 0.87
RABGGTA-206ENST00000558649 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
RABGGTA-206ENST00000558649 WWC3Q9ULE0 1092 aa20.5■□□□□ 0.87
RABGGTA-206ENST00000558649 KIAA1551Q9HCM1 1747 aa20.5■□□□□ 0.87
RABGGTA-206ENST00000558649 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 SERPINB2P05120 415 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 HLFQ16534 295 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
RABGGTA-206ENST00000558649 NPHP1O15259 732 aa20.48■□□□□ 0.87
RABGGTA-206ENST00000558649 LRP10Q7Z4F1 713 aa20.48■□□□□ 0.87
RABGGTA-206ENST00000558649 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
RABGGTA-206ENST00000558649 DBF4Q9UBU7 674 aaPredicted RBP20.48■□□□□ 0.87
RABGGTA-206ENST00000558649 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 ZNF521Q96K83 1311 aa20.47■□□□□ 0.87
RABGGTA-206ENST00000558649 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
RABGGTA-206ENST00000558649 FAM177BA6PVY3 158 aa20.46■□□□□ 0.87
RABGGTA-206ENST00000558649 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
RABGGTA-206ENST00000558649 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
RABGGTA-206ENST00000558649 ANKRD36CQ5JPF3 1778 aa20.46■□□□□ 0.87
RABGGTA-206ENST00000558649 ERVV-1B6SEH8 477 aa20.45■□□□□ 0.86
RABGGTA-206ENST00000558649 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
RABGGTA-206ENST00000558649 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
RABGGTA-206ENST00000558649 GPR162Q16538 588 aa20.45■□□□□ 0.86
RABGGTA-206ENST00000558649 A0A0G2JLW4 131 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 GPTP24298 496 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 CNBD1Q8NA66 436 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 HYPKQ9NX55 129 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
RABGGTA-206ENST00000558649 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
RABGGTA-206ENST00000558649 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
RABGGTA-206ENST00000558649 ATP10DQ9P241 1426 aa20.43■□□□□ 0.86
RABGGTA-206ENST00000558649 DPEP1P16444 411 aa20.42■□□□□ 0.86
RABGGTA-206ENST00000558649 TGFB2P61812 414 aa20.42■□□□□ 0.86
RABGGTA-206ENST00000558649 PRR5LQ6MZQ0 368 aa20.42■□□□□ 0.86
RABGGTA-206ENST00000558649 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
RABGGTA-206ENST00000558649 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
RABGGTA-206ENST00000558649 RGL2O15211 777 aa20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 CHRNA5P30532 468 aa20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 ST5P78524 1137 aa20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
RABGGTA-206ENST00000558649 COL11A2P13942 1736 aaPredicted RBP20.4■□□□□ 0.86
RABGGTA-206ENST00000558649 DLEC1Q9Y238 1755 aa20.39■□□□□ 0.86
RABGGTA-206ENST00000558649 UBN2Q6ZU65 1347 aa20.39■□□□□ 0.85
RABGGTA-206ENST00000558649 E9PSI1 815 aa20.39■□□□□ 0.85
RABGGTA-206ENST00000558649 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
RABGGTA-206ENST00000558649 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
RABGGTA-206ENST00000558649 GTF2E1P29083 439 aaPredicted RBP20.38■□□□□ 0.85
RABGGTA-206ENST00000558649 HNRNPUQ00839 825 aaKnown RBP eCLIP20.38■□□□□ 0.85
RABGGTA-206ENST00000558649 ANKRD13DQ6ZTN6 518 aa20.38■□□□□ 0.85
RABGGTA-206ENST00000558649 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
RABGGTA-206ENST00000558649 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
RABGGTA-206ENST00000558649 VAMP4O75379 141 aa20.37■□□□□ 0.85
RABGGTA-206ENST00000558649 TPTE2Q6XPS3 522 aa20.37■□□□□ 0.85
RABGGTA-206ENST00000558649 ZNF34Q8IZ26 560 aa20.37■□□□□ 0.85
RABGGTA-206ENST00000558649 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
RABGGTA-206ENST00000558649 TNRC6CQ9HCJ0 1690 aaKnown RBP20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 RIC3Q7Z5B4 369 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 NUTM1Q86Y26 1132 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 C2CD5Q86YS7 1000 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 BCS1LQ9Y276 419 aa20.36■□□□□ 0.85
RABGGTA-206ENST00000558649 KCNA3P22001 575 aa20.35■□□□□ 0.85
RABGGTA-206ENST00000558649 PDE6BP35913 854 aa20.35■□□□□ 0.85
RABGGTA-206ENST00000558649 SUSD4Q5VX71 490 aa20.35■□□□□ 0.85
RABGGTA-206ENST00000558649 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
RABGGTA-206ENST00000558649 NYXQ9GZU5 481 aa20.35■□□□□ 0.85
RABGGTA-206ENST00000558649 H0YIN7 160 aa20.34■□□□□ 0.85
RABGGTA-206ENST00000558649 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
RABGGTA-206ENST00000558649 G2E3Q7L622 706 aa20.34■□□□□ 0.85
RABGGTA-206ENST00000558649 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
RABGGTA-206ENST00000558649 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
RABGGTA-206ENST00000558649 ATP5J2-PTCD1G3V325 749 aa20.33■□□□□ 0.85
RABGGTA-206ENST00000558649 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.85
RABGGTA-206ENST00000558649 ERFEQ4G0M1 354 aa20.33■□□□□ 0.85
RABGGTA-206ENST00000558649 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
RABGGTA-206ENST00000558649 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.85
RABGGTA-206ENST00000558649 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 NTSR2O95665 410 aa20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 NLRP10Q86W26 655 aa20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 ZNF622Q969S3 477 aaKnown RBP eCLIP20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
RABGGTA-206ENST00000558649 DALRD3Q5D0E6 543 aaKnown RBP20.31■□□□□ 0.84
RABGGTA-206ENST00000558649 MYD88Q99836 296 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms