RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	CCDC146	Q8IYE0	955 aa		28.75	■■■□□ 2.19
TCF12-208	ENST00000557947	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
TCF12-208	ENST00000557947	NFKBIE	O00221	500 aa		28.74	■■■□□ 2.19
TCF12-208	ENST00000557947	RRP7A	Q9Y3A4	280 aa	Known RBP	28.74	■■■□□ 2.19
TCF12-208	ENST00000557947	ST5	P78524	1137 aa		28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	NGEF	Q8N5V2	710 aa		28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	TSPYL4	Q9UJ04	414 aa		28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
TCF12-208	ENST00000557947	SRGN	P10124	158 aa		28.72	■■■□□ 2.19
TCF12-208	ENST00000557947	TTLL7	Q6ZT98	887 aa		28.72	■■■□□ 2.19
TCF12-208	ENST00000557947	NPHP1	O15259	732 aa		28.7	■■■□□ 2.18
TCF12-208	ENST00000557947	ADAMTS8	Q9UP79	889 aa		28.7	■■■□□ 2.18
TCF12-208	ENST00000557947	C21orf2	O43822	256 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	MYL6B	P14649	208 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	LMNB1	P20700	586 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	STYK1	Q6J9G0	422 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	TRIM35	Q9UPQ4	493 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	SLX4	Q8IY92	1834 aa		28.69	■■■□□ 2.18
TCF12-208	ENST00000557947	KLRG2	A4D1S0	409 aa	Predicted RBP	28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	FAM177B	A6PVY3	158 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	ERVV-1	B6SEH8	477 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	NEUROD2	Q15784	382 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	LRP10	Q7Z4F1	713 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	RUNDC1	Q96C34	613 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	BABAM1	Q9NWV8	329 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	MAP3K15	Q6ZN16	1313 aa		28.68	■■■□□ 2.18
TCF12-208	ENST00000557947	CEP350	Q5VT06	3117 aa		28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	LMOD3	Q0VAK6	560 aa		28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	WDR43	Q15061	677 aa	Known RBP eCLIP	28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	PDIA6	Q15084	440 aa		28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	TPTE2	Q6XPS3	522 aa		28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	MASTL	Q96GX5	879 aa		28.67	■■■□□ 2.18
TCF12-208	ENST00000557947	HSPA6	P17066	643 aa		28.66	■■■□□ 2.18
TCF12-208	ENST00000557947	CNKSR1	Q969H4	720 aa		28.66	■■■□□ 2.18
TCF12-208	ENST00000557947	ERBB4	Q15303	1308 aa		28.66	■■■□□ 2.18
TCF12-208	ENST00000557947	NUP98	P52948	1817 aa		28.65	■■■□□ 2.18
TCF12-208	ENST00000557947	TOMM70	O94826	608 aa		28.65	■■■□□ 2.18
TCF12-208	ENST00000557947	PRPF40B	Q6NWY9	871 aa	Known RBP	28.65	■■■□□ 2.18
TCF12-208	ENST00000557947	FER1L6	Q2WGJ9	1857 aa		28.65	■■■□□ 2.18
TCF12-208	ENST00000557947	CCDC88A	Q3V6T2	1871 aa		28.64	■■■□□ 2.18
TCF12-208	ENST00000557947	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.64	■■■□□ 2.17
TCF12-208	ENST00000557947	ARFGEF2	Q9Y6D5	1785 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	CHL1	O00533	1208 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	C7orf43	Q8WVR3	580 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	ZBTB3	Q9H5J0	574 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	CACNA1S	Q13698	1873 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	KDM2B	Q8NHM5	1336 aa		28.63	■■■□□ 2.17
TCF12-208	ENST00000557947	EIF2S2	P20042	333 aa	Known RBP	28.62	■■■□□ 2.17
TCF12-208	ENST00000557947	PROSER3	Q2NL68	480 aa		28.62	■■■□□ 2.17
TCF12-208	ENST00000557947	KIF6	Q6ZMV9	814 aa		28.62	■■■□□ 2.17
TCF12-208	ENST00000557947	RRAGC	Q9HB90	399 aa		28.62	■■■□□ 2.17
TCF12-208	ENST00000557947	NPR1	P16066	1061 aa		28.61	■■■□□ 2.17
TCF12-208	ENST00000557947	KRT24	Q2M2I5	525 aa		28.61	■■■□□ 2.17
TCF12-208	ENST00000557947	UBN2	Q6ZU65	1347 aa		28.61	■■■□□ 2.17
TCF12-208	ENST00000557947	ABCC12	Q96J65	1359 aa		28.61	■■■□□ 2.17
TCF12-208	ENST00000557947	ANXA1	P04083	346 aa		28.6	■■■□□ 2.17
TCF12-208	ENST00000557947	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.6	■■■□□ 2.17
TCF12-208	ENST00000557947	TIAM2	Q8IVF5	1701 aa		28.6	■■■□□ 2.17
TCF12-208	ENST00000557947	GPT	P24298	496 aa		28.59	■■■□□ 2.17
TCF12-208	ENST00000557947	NUTM1	Q86Y26	1132 aa		28.59	■■■□□ 2.17
TCF12-208	ENST00000557947	ZNF34	Q8IZ26	560 aa		28.59	■■■□□ 2.17
TCF12-208	ENST00000557947	LTBP3	Q9NS15	1303 aa		28.59	■■■□□ 2.17
TCF12-208	ENST00000557947	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.58	■■■□□ 2.17
TCF12-208	ENST00000557947	GLTPD2	A6NH11	291 aa		28.57	■■■□□ 2.16
TCF12-208	ENST00000557947	ERFE	Q4G0M1	354 aa		28.57	■■■□□ 2.16
TCF12-208	ENST00000557947	SUSD4	Q5VX71	490 aa		28.57	■■■□□ 2.16
TCF12-208	ENST00000557947	RBM46	Q8TBY0	533 aa	Known RBP	28.56	■■■□□ 2.16
TCF12-208	ENST00000557947	NECTIN2	Q92692	538 aa		28.56	■■■□□ 2.16
TCF12-208	ENST00000557947	NYX	Q9GZU5	481 aa		28.56	■■■□□ 2.16
TCF12-208	ENST00000557947	LAS1L	Q9Y4W2	734 aa	Known RBP	28.56	■■■□□ 2.16
TCF12-208	ENST00000557947	GTF2E1	P29083	439 aa	Predicted RBP	28.55	■■■□□ 2.16
TCF12-208	ENST00000557947	OLFM4	Q6UX06	510 aa		28.55	■■■□□ 2.16
TCF12-208	ENST00000557947	TAOK3	Q9H2K8	898 aa		28.55	■■■□□ 2.16
TCF12-208	ENST00000557947	DICER1	Q9UPY3	1922 aa	Known RBP	28.55	■■■□□ 2.16
TCF12-208	ENST00000557947	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.54	■■■□□ 2.16
TCF12-208	ENST00000557947	CRY2	Q49AN0	593 aa		28.54	■■■□□ 2.16
TCF12-208	ENST00000557947	NTSR2	O95665	410 aa		28.53	■■■□□ 2.16
TCF12-208	ENST00000557947	SOGA3	Q5TF21	947 aa		28.53	■■■□□ 2.16
TCF12-208	ENST00000557947	RIC1	Q4ADV7	1423 aa		28.52	■■■□□ 2.16
TCF12-208	ENST00000557947	POTEC	B2RU33	542 aa		28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	APAF1	O14727	1248 aa		28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	CCDC184	Q52MB2	194 aa		28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	CCDC93	Q567U6	631 aa		28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	COPS6	Q7L5N1	327 aa		28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	C16orf71	Q8IYS4	520 aa	Predicted RBP	28.51	■■■□□ 2.15
TCF12-208	ENST00000557947	XAGE3	Q8WTP9	111 aa		28.5	■■■□□ 2.15
TCF12-208	ENST00000557947	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.5	■■■□□ 2.15
TCF12-208	ENST00000557947	C3orf67	Q6ZVT6	689 aa		28.49	■■■□□ 2.15
TCF12-208	ENST00000557947	CFAP44	Q96MT7	982 aa		28.49	■■■□□ 2.15
TCF12-208	ENST00000557947	ZNF853	P0CG23	659 aa		28.48	■■■□□ 2.15
TCF12-208	ENST00000557947	VEGFA	P15692	232 aa	Predicted RBP	28.48	■■■□□ 2.15
TCF12-208	ENST00000557947	ALDH1B1	P30837	517 aa		28.48	■■■□□ 2.15
TCF12-208	ENST00000557947	AIMP1	Q12904	312 aa	Known RBP	28.48	■■■□□ 2.15
TCF12-208	ENST00000557947	SNED1	Q8TER0	1413 aa		28.48	■■■□□ 2.15
TCF12-208	ENST00000557947	FSTL1	Q12841	308 aa		28.47	■■■□□ 2.15
TCF12-208	ENST00000557947	PARP10	Q53GL7	1025 aa		28.47	■■■□□ 2.15
TCF12-208	ENST00000557947	CHPF2	Q9P2E5	772 aa		28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms