RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
PABPN1-208ENST00000557702 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
PABPN1-208ENST00000557702 NPHP1O15259 732 aa13.06□□□□□ -0.32
PABPN1-208ENST00000557702 SRGNP10124 158 aa13.06□□□□□ -0.32
PABPN1-208ENST00000557702 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
PABPN1-208ENST00000557702 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
PABPN1-208ENST00000557702 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
PABPN1-208ENST00000557702 GPC2Q8N158 579 aa13.06□□□□□ -0.32
PABPN1-208ENST00000557702 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
PABPN1-208ENST00000557702 TJP1Q07157 1748 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 A0A087WZG4 1122 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 FZD9O00144 591 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 LMOD1P29536 600 aaPredicted RBP13.05□□□□□ -0.32
PABPN1-208ENST00000557702 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
PABPN1-208ENST00000557702 TRAF5O00463 557 aa13.04□□□□□ -0.32
PABPN1-208ENST00000557702 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
PABPN1-208ENST00000557702 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
PABPN1-208ENST00000557702 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
PABPN1-208ENST00000557702 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
PABPN1-208ENST00000557702 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
PABPN1-208ENST00000557702 ST5P78524 1137 aa13.03□□□□□ -0.32
PABPN1-208ENST00000557702 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
PABPN1-208ENST00000557702 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
PABPN1-208ENST00000557702 ANKRD31Q8N7Z5 1873 aa13.03□□□□□ -0.32
PABPN1-208ENST00000557702 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.32
PABPN1-208ENST00000557702 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
PABPN1-208ENST00000557702 JDP2Q8WYK2 163 aa13.02□□□□□ -0.33
PABPN1-208ENST00000557702 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
PABPN1-208ENST00000557702 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.33
PABPN1-208ENST00000557702 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
PABPN1-208ENST00000557702 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
PABPN1-208ENST00000557702 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
PABPN1-208ENST00000557702 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
PABPN1-208ENST00000557702 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
PABPN1-208ENST00000557702 COL11A2P13942 1736 aaPredicted RBP13□□□□□ -0.33
PABPN1-208ENST00000557702 EPS15P42566 896 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 NOGQ13253 232 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 SLC39A6Q13433 755 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 SYNE4Q8N205 404 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
PABPN1-208ENST00000557702 TRPM7Q96QT4 1865 aa12.99□□□□□ -0.33
PABPN1-208ENST00000557702 STARD3NLO95772 234 aa12.99□□□□□ -0.33
PABPN1-208ENST00000557702 NPR1P16066 1061 aa12.99□□□□□ -0.33
PABPN1-208ENST00000557702 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
PABPN1-208ENST00000557702 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
PABPN1-208ENST00000557702 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
PABPN1-208ENST00000557702 SCNN1DP51172 638 aa12.98□□□□□ -0.33
PABPN1-208ENST00000557702 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
PABPN1-208ENST00000557702 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
PABPN1-208ENST00000557702 SAGE1Q9NXZ1 904 aa12.97□□□□□ -0.33
PABPN1-208ENST00000557702 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
PABPN1-208ENST00000557702 CACNA1SQ13698 1873 aa12.97□□□□□ -0.33
PABPN1-208ENST00000557702 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
PABPN1-208ENST00000557702 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
PABPN1-208ENST00000557702 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
PABPN1-208ENST00000557702 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
PABPN1-208ENST00000557702 PSMD1Q99460 953 aa12.96□□□□□ -0.33
PABPN1-208ENST00000557702 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.33
PABPN1-208ENST00000557702 LGR6Q9HBX8 967 aa12.96□□□□□ -0.33
PABPN1-208ENST00000557702 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
PABPN1-208ENST00000557702 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
PABPN1-208ENST00000557702 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
PABPN1-208ENST00000557702 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
PABPN1-208ENST00000557702 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
PABPN1-208ENST00000557702 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
PABPN1-208ENST00000557702 ADARB2Q9NS39 739 aaKnown RBP12.94□□□□□ -0.34
PABPN1-208ENST00000557702 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
PABPN1-208ENST00000557702 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
PABPN1-208ENST00000557702 RNMTO43148 476 aaKnown RBP12.93□□□□□ -0.34
PABPN1-208ENST00000557702 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
PABPN1-208ENST00000557702 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
PABPN1-208ENST00000557702 RNF186Q9NXI6 227 aa12.93□□□□□ -0.34
PABPN1-208ENST00000557702 TRPA1O75762 1119 aa12.92□□□□□ -0.34
PABPN1-208ENST00000557702 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
PABPN1-208ENST00000557702 HUNKP57058 714 aa12.92□□□□□ -0.34
PABPN1-208ENST00000557702 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
PABPN1-208ENST00000557702 LARGE2Q8N3Y3 721 aa12.92□□□□□ -0.34
PABPN1-208ENST00000557702 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
PABPN1-208ENST00000557702 GPRC5DQ9NZD1 345 aa12.92□□□□□ -0.34
PABPN1-208ENST00000557702 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
PABPN1-208ENST00000557702 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
PABPN1-208ENST00000557702 CDC37L1Q7L3B6 337 aa12.91□□□□□ -0.34
PABPN1-208ENST00000557702 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
PABPN1-208ENST00000557702 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
PABPN1-208ENST00000557702 FXR1P51114 621 aaKnown RBP eCLIP12.9□□□□□ -0.34
PABPN1-208ENST00000557702 ZC3H15Q8WU90 426 aaKnown RBP12.9□□□□□ -0.34
PABPN1-208ENST00000557702 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
PABPN1-208ENST00000557702 PGAP2Q9UHJ9 254 aa12.9□□□□□ -0.34
PABPN1-208ENST00000557702 FAM155AB1AL88 458 aaPredicted RBP12.89□□□□□ -0.35
PABPN1-208ENST00000557702 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
PABPN1-208ENST00000557702 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
PABPN1-208ENST00000557702 RGMBQ6NW40 437 aa12.89□□□□□ -0.35
PABPN1-208ENST00000557702 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
PABPN1-208ENST00000557702 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
PABPN1-208ENST00000557702 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
PABPN1-208ENST00000557702 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms