RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
NEK9-211ENST00000557673 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
NEK9-211ENST00000557673 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
NEK9-211ENST00000557673 MASTLQ96GX5 879 aa22.03■■□□□ 1.12
NEK9-211ENST00000557673 SCN7AQ01118 1682 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 CAPN15O75808 1086 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 SRGNP10124 158 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 CCDC24Q8N4L8 307 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 RTF1Q92541 710 aaKnown RBP22.02■■□□□ 1.12
NEK9-211ENST00000557673 ZNF652Q9Y2D9 606 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 TIAM2Q8IVF5 1701 aa22.02■■□□□ 1.12
NEK9-211ENST00000557673 POTECB2RU33 542 aa22.01■■□□□ 1.11
NEK9-211ENST00000557673 CCDC88AQ3V6T2 1871 aa22■■□□□ 1.11
NEK9-211ENST00000557673 ANP32CO43423 234 aa22■■□□□ 1.11
NEK9-211ENST00000557673 SNRPA1P09661 255 aaKnown RBP22■■□□□ 1.11
NEK9-211ENST00000557673 PRPF40BQ6NWY9 871 aaKnown RBP22■■□□□ 1.11
NEK9-211ENST00000557673 NBPF5PQ86XG9 351 aaPredicted RBP22■■□□□ 1.11
NEK9-211ENST00000557673 ANKRD31Q8N7Z5 1873 aa21.99■■□□□ 1.11
NEK9-211ENST00000557673 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
NEK9-211ENST00000557673 RGL2O15211 777 aa21.98■■□□□ 1.11
NEK9-211ENST00000557673 KCNQ3O43525 872 aa21.98■■□□□ 1.11
NEK9-211ENST00000557673 CHADLQ6NUI6 762 aa21.98■■□□□ 1.11
NEK9-211ENST00000557673 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
NEK9-211ENST00000557673 PCNTO95613 3336 aa21.97■■□□□ 1.11
NEK9-211ENST00000557673 IQCA1LA6NCM1 817 aa21.97■■□□□ 1.11
NEK9-211ENST00000557673 FER1L6Q2WGJ9 1857 aa21.96■■□□□ 1.11
NEK9-211ENST00000557673 NPR1P16066 1061 aa21.96■■□□□ 1.11
NEK9-211ENST00000557673 TPTE2Q6XPS3 522 aa21.96■■□□□ 1.11
NEK9-211ENST00000557673 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
NEK9-211ENST00000557673 HSPA1AP0DMV8 641 aaKnown RBP21.95■■□□□ 1.1
NEK9-211ENST00000557673 HSPA1BP0DMV9 641 aaKnown RBP21.95■■□□□ 1.1
NEK9-211ENST00000557673 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
NEK9-211ENST00000557673 CREBZFQ9NS37 354 aa21.95■■□□□ 1.1
NEK9-211ENST00000557673 DICER1Q9UPY3 1922 aaKnown RBP21.95■■□□□ 1.1
NEK9-211ENST00000557673 COL11A2P13942 1736 aaPredicted RBP21.94■■□□□ 1.1
NEK9-211ENST00000557673 DDNO94850 711 aaPredicted RBP21.94■■□□□ 1.1
NEK9-211ENST00000557673 MCM10Q7L590 875 aa21.94■■□□□ 1.1
NEK9-211ENST00000557673 DLG5Q8TDM6 1919 aa21.92■■□□□ 1.1
NEK9-211ENST00000557673 SLX4Q8IY92 1834 aa21.92■■□□□ 1.1
NEK9-211ENST00000557673 KLRG2A4D1S0 409 aaPredicted RBP21.92■■□□□ 1.1
NEK9-211ENST00000557673 PIP4K2AP48426 406 aaPredicted RBP21.92■■□□□ 1.1
NEK9-211ENST00000557673 DCTN1Q14203 1278 aa21.92■■□□□ 1.1
NEK9-211ENST00000557673 C7orf43Q8WVR3 580 aa21.92■■□□□ 1.1
NEK9-211ENST00000557673 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
NEK9-211ENST00000557673 RTKN2Q8IZC4 609 aa21.91■■□□□ 1.1
NEK9-211ENST00000557673 L3MBTL3Q96JM7 780 aaPredicted RBP21.91■■□□□ 1.1
NEK9-211ENST00000557673 BCORQ6W2J9 1755 aa21.91■■□□□ 1.1
NEK9-211ENST00000557673 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
NEK9-211ENST00000557673 ALDH1B1P30837 517 aa21.9■■□□□ 1.1
NEK9-211ENST00000557673 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
NEK9-211ENST00000557673 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
NEK9-211ENST00000557673 LDHDQ86WU2 507 aa21.9■■□□□ 1.1
NEK9-211ENST00000557673 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
NEK9-211ENST00000557673 NEFMP07197 916 aa21.89■■□□□ 1.09
NEK9-211ENST00000557673 GTF2E1P29083 439 aaPredicted RBP21.89■■□□□ 1.09
NEK9-211ENST00000557673 ARFGEF2Q9Y6D5 1785 aa21.87■■□□□ 1.09
NEK9-211ENST00000557673 NBPF26B4DH59 902 aa21.87■■□□□ 1.09
NEK9-211ENST00000557673 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
NEK9-211ENST00000557673 NBPF10Q6P3W6 841 aaKnown RBP21.87■■□□□ 1.09
NEK9-211ENST00000557673 NBPF15Q8N660 670 aa21.87■■□□□ 1.09
NEK9-211ENST00000557673 TAF1DQ9H5J8 278 aaPredicted RBP21.87■■□□□ 1.09
NEK9-211ENST00000557673 POTEIP0CG38 1075 aa21.86■■□□□ 1.09
NEK9-211ENST00000557673 POTEJP0CG39 1038 aa21.86■■□□□ 1.09
NEK9-211ENST00000557673 PNISRQ8TF01 805 aaKnown RBP21.86■■□□□ 1.09
NEK9-211ENST00000557673 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
NEK9-211ENST00000557673 ZNF277Q9NRM2 450 aaPredicted RBP21.86■■□□□ 1.09
NEK9-211ENST00000557673 MKRN1Q9UHC7 482 aaKnown RBP21.86■■□□□ 1.09
NEK9-211ENST00000557673 MAPK8IP3Q9UPT6 1336 aa21.85■■□□□ 1.09
NEK9-211ENST00000557673 NFE2L2Q16236 605 aa21.85■■□□□ 1.09
NEK9-211ENST00000557673 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
NEK9-211ENST00000557673 HACL1Q9UJ83 578 aa21.85■■□□□ 1.09
NEK9-211ENST00000557673 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
NEK9-211ENST00000557673 PNMA8AQ86V59 439 aaPredicted RBP21.84■■□□□ 1.09
NEK9-211ENST00000557673 CACNA1SQ13698 1873 aa21.83■■□□□ 1.09
NEK9-211ENST00000557673 PASKQ96RG2 1323 aa21.83■■□□□ 1.09
NEK9-211ENST00000557673 SCN4AP35499 1836 aa21.83■■□□□ 1.09
NEK9-211ENST00000557673 ERVV-1B6SEH8 477 aa21.83■■□□□ 1.09
NEK9-211ENST00000557673 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
NEK9-211ENST00000557673 EAPPQ56P03 285 aaPredicted RBP21.83■■□□□ 1.09
NEK9-211ENST00000557673 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
NEK9-211ENST00000557673 MRS2Q9HD23 443 aa21.83■■□□□ 1.09
NEK9-211ENST00000557673 TMEM88BA6NKF7 163 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 HLFQ16534 295 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 CC2D2BQ6DHV5 1058 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 JDP2Q8WYK2 163 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
NEK9-211ENST00000557673 MIS18AQ9NYP9 233 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 CLEC11AQ9Y240 323 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 CNTNAP1P78357 1384 aa21.82■■□□□ 1.08
NEK9-211ENST00000557673 EPHX2P34913 555 aa21.81■■□□□ 1.08
NEK9-211ENST00000557673 IARSP41252 1262 aaKnown RBP21.81■■□□□ 1.08
NEK9-211ENST00000557673 GRIPAP1Q4V328 841 aa21.81■■□□□ 1.08
NEK9-211ENST00000557673 SYNE4Q8N205 404 aa21.81■■□□□ 1.08
NEK9-211ENST00000557673 PSMD1Q99460 953 aa21.81■■□□□ 1.08
NEK9-211ENST00000557673 KDM3BQ7LBC6 1761 aa21.81■■□□□ 1.08
NEK9-211ENST00000557673 ZNF541Q9H0D2 1346 aa21.8■■□□□ 1.08
NEK9-211ENST00000557673 FZD9O00144 591 aa21.8■■□□□ 1.08
NEK9-211ENST00000557673 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
NEK9-211ENST00000557673 KIF6Q6ZMV9 814 aa21.8■■□□□ 1.08
NEK9-211ENST00000557673 GPC2Q8N158 579 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 335 ms