RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZC3H4Q9UPT8 1303 aaKnown RBP18.73■□□□□ 0.59
SNX6-210ENST00000557341 HSPA6P17066 643 aa18.72■□□□□ 0.59
SNX6-210ENST00000557341 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
SNX6-210ENST00000557341 MIS18AQ9NYP9 233 aa18.72■□□□□ 0.59
SNX6-210ENST00000557341 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
SNX6-210ENST00000557341 RGL2O15211 777 aa18.71■□□□□ 0.59
SNX6-210ENST00000557341 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
SNX6-210ENST00000557341 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
SNX6-210ENST00000557341 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
SNX6-210ENST00000557341 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNX6-210ENST00000557341 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
SNX6-210ENST00000557341 TOMM70O94826 608 aa18.7■□□□□ 0.58
SNX6-210ENST00000557341 LMNB1P20700 586 aa18.7■□□□□ 0.58
SNX6-210ENST00000557341 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
SNX6-210ENST00000557341 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
SNX6-210ENST00000557341 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
SNX6-210ENST00000557341 EIF4A1P60842 406 aaKnown RBP18.68■□□□□ 0.58
SNX6-210ENST00000557341 NFKBIEO00221 500 aa18.67■□□□□ 0.58
SNX6-210ENST00000557341 STYK1Q6J9G0 422 aa18.67■□□□□ 0.58
SNX6-210ENST00000557341 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
SNX6-210ENST00000557341 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNX6-210ENST00000557341 C21orf2O43822 256 aa18.66■□□□□ 0.58
SNX6-210ENST00000557341 SRGNP10124 158 aa18.66■□□□□ 0.58
SNX6-210ENST00000557341 CNKSR1Q969H4 720 aa18.66■□□□□ 0.58
SNX6-210ENST00000557341 PRELPP51888 382 aa18.65■□□□□ 0.58
SNX6-210ENST00000557341 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
SNX6-210ENST00000557341 MASTLQ96GX5 879 aa18.65■□□□□ 0.58
SNX6-210ENST00000557341 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
SNX6-210ENST00000557341 LAMB2P55268 1798 aa18.64■□□□□ 0.57
SNX6-210ENST00000557341 RIPK4P57078 832 aa18.64■□□□□ 0.57
SNX6-210ENST00000557341 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
SNX6-210ENST00000557341 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
SNX6-210ENST00000557341 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
SNX6-210ENST00000557341 RBM46Q8TBY0 533 aaKnown RBP18.64■□□□□ 0.57
SNX6-210ENST00000557341 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
SNX6-210ENST00000557341 ERBB4Q15303 1308 aa18.64■□□□□ 0.57
SNX6-210ENST00000557341 HLFQ16534 295 aa18.63■□□□□ 0.57
SNX6-210ENST00000557341 SOGA3Q5TF21 947 aa18.63■□□□□ 0.57
SNX6-210ENST00000557341 MAP3K15Q6ZN16 1313 aa18.63■□□□□ 0.57
SNX6-210ENST00000557341 LTBP3Q9NS15 1303 aa18.63■□□□□ 0.57
SNX6-210ENST00000557341 ERVV-1B6SEH8 477 aa18.62■□□□□ 0.57
SNX6-210ENST00000557341 MYL6BP14649 208 aa18.62■□□□□ 0.57
SNX6-210ENST00000557341 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
SNX6-210ENST00000557341 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
SNX6-210ENST00000557341 TAOK3Q9H2K8 898 aa18.62■□□□□ 0.57
SNX6-210ENST00000557341 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
SNX6-210ENST00000557341 SCN4AP35499 1836 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 IBTKQ9P2D0 1353 aaPredicted RBP18.61■□□□□ 0.57
SNX6-210ENST00000557341 GLTPD2A6NH11 291 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 FAM177BA6PVY3 158 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 APLP1P51693 650 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.57
SNX6-210ENST00000557341 RRAGCQ9HB90 399 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
SNX6-210ENST00000557341 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
SNX6-210ENST00000557341 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
SNX6-210ENST00000557341 NPR1P16066 1061 aa18.6■□□□□ 0.57
SNX6-210ENST00000557341 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
SNX6-210ENST00000557341 NYXQ9GZU5 481 aa18.6■□□□□ 0.57
SNX6-210ENST00000557341 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
SNX6-210ENST00000557341 FSTL1Q12841 308 aa18.59■□□□□ 0.57
SNX6-210ENST00000557341 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
SNX6-210ENST00000557341 TTLL7Q6ZT98 887 aa18.59■□□□□ 0.57
SNX6-210ENST00000557341 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
SNX6-210ENST00000557341 ZBTB3Q9H5J0 574 aa18.59■□□□□ 0.57
SNX6-210ENST00000557341 CCDC93Q567U6 631 aa18.58■□□□□ 0.56
SNX6-210ENST00000557341 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
SNX6-210ENST00000557341 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
SNX6-210ENST00000557341 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
SNX6-210ENST00000557341 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
SNX6-210ENST00000557341 DPY19L2Q6NUT2 758 aa18.56■□□□□ 0.56
SNX6-210ENST00000557341 EIF2S2P20042 333 aaKnown RBP18.55■□□□□ 0.56
SNX6-210ENST00000557341 GPTP24298 496 aa18.55■□□□□ 0.56
SNX6-210ENST00000557341 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
SNX6-210ENST00000557341 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
SNX6-210ENST00000557341 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
SNX6-210ENST00000557341 C7orf43Q8WVR3 580 aa18.55■□□□□ 0.56
SNX6-210ENST00000557341 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
SNX6-210ENST00000557341 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
SNX6-210ENST00000557341 ALDH1B1P30837 517 aa18.54■□□□□ 0.56
SNX6-210ENST00000557341 CRY2Q49AN0 593 aa18.54■□□□□ 0.56
SNX6-210ENST00000557341 LRP10Q7Z4F1 713 aa18.54■□□□□ 0.56
SNX6-210ENST00000557341 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNX6-210ENST00000557341 PDIA6Q15084 440 aa18.53■□□□□ 0.56
SNX6-210ENST00000557341 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
SNX6-210ENST00000557341 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
SNX6-210ENST00000557341 SNED1Q8TER0 1413 aa18.52■□□□□ 0.56
SNX6-210ENST00000557341 NTSR2O95665 410 aa18.52■□□□□ 0.56
SNX6-210ENST00000557341 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
SNX6-210ENST00000557341 SUSD4Q5VX71 490 aa18.52■□□□□ 0.56
SNX6-210ENST00000557341 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
SNX6-210ENST00000557341 CHL1O00533 1208 aa18.51■□□□□ 0.55
SNX6-210ENST00000557341 PROSER3Q2NL68 480 aa18.51■□□□□ 0.55
SNX6-210ENST00000557341 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
SNX6-210ENST00000557341 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
SNX6-210ENST00000557341 RPGRQ92834 1020 aaKnown RBP18.51■□□□□ 0.55
SNX6-210ENST00000557341 LAS1LQ9Y4W2 734 aaKnown RBP18.51■□□□□ 0.55
SNX6-210ENST00000557341 TAF1P21675 1872 aa18.51■□□□□ 0.55
SNX6-210ENST00000557341 ANXA1P04083 346 aa18.5■□□□□ 0.55
SNX6-210ENST00000557341 NECTIN2Q92692 538 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms