RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 NBPF5PQ86XG9 351 aaPredicted RBP23.41■■□□□ 1.34
XRCC3-217ENST00000556980 NIP7Q9Y221 180 aaKnown RBP eCLIP23.41■■□□□ 1.34
XRCC3-217ENST00000556980 ST5P78524 1137 aa23.4■■□□□ 1.34
XRCC3-217ENST00000556980 KRT24Q2M2I5 525 aa23.4■■□□□ 1.34
XRCC3-217ENST00000556980 C2CD5Q86YS7 1000 aa23.4■■□□□ 1.34
XRCC3-217ENST00000556980 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
XRCC3-217ENST00000556980 BRIP1Q9BX63 1249 aa23.4■■□□□ 1.34
XRCC3-217ENST00000556980 MAP3K15Q6ZN16 1313 aa23.39■■□□□ 1.34
XRCC3-217ENST00000556980 ERVV-1B6SEH8 477 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 H0YIN7 160 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 HLFQ16534 295 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 TTLL7Q6ZT98 887 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 CCDC24Q8N4L8 307 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
XRCC3-217ENST00000556980 PDE6BP35913 854 aa23.38■■□□□ 1.33
XRCC3-217ENST00000556980 GNAI1P63096 354 aa23.38■■□□□ 1.33
XRCC3-217ENST00000556980 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
XRCC3-217ENST00000556980 ZBTB3Q9H5J0 574 aa23.38■■□□□ 1.33
XRCC3-217ENST00000556980 PDIA6Q15084 440 aa23.37■■□□□ 1.33
XRCC3-217ENST00000556980 PDZRN3Q9UPQ7 1066 aa23.37■■□□□ 1.33
XRCC3-217ENST00000556980 HOXB7P09629 217 aa23.36■■□□□ 1.33
XRCC3-217ENST00000556980 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
XRCC3-217ENST00000556980 PROSER3Q2NL68 480 aa23.36■■□□□ 1.33
XRCC3-217ENST00000556980 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
XRCC3-217ENST00000556980 BRCA1P38398 1863 aaKnown RBP23.35■■□□□ 1.33
XRCC3-217ENST00000556980 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
XRCC3-217ENST00000556980 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
XRCC3-217ENST00000556980 ANXA1P04083 346 aa23.35■■□□□ 1.33
XRCC3-217ENST00000556980 TPTE2Q6XPS3 522 aa23.35■■□□□ 1.33
XRCC3-217ENST00000556980 ATP10DQ9P241 1426 aa23.34■■□□□ 1.33
XRCC3-217ENST00000556980 DUSP27Q5VZP5 1158 aa23.34■■□□□ 1.33
XRCC3-217ENST00000556980 LRP10Q7Z4F1 713 aa23.34■■□□□ 1.33
XRCC3-217ENST00000556980 TTLL6Q8N841 843 aa23.34■■□□□ 1.33
XRCC3-217ENST00000556980 DDX21Q9NR30 783 aaKnown RBP eCLIP23.33■■□□□ 1.33
XRCC3-217ENST00000556980 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
XRCC3-217ENST00000556980 CCDC27Q2M243 656 aa23.32■■□□□ 1.32
XRCC3-217ENST00000556980 ZNF622Q969S3 477 aaKnown RBP eCLIP23.32■■□□□ 1.32
XRCC3-217ENST00000556980 CHPF2Q9P2E5 772 aa23.32■■□□□ 1.32
XRCC3-217ENST00000556980 GPTP24298 496 aa23.31■■□□□ 1.32
XRCC3-217ENST00000556980 AIMP1Q12904 312 aaKnown RBP23.31■■□□□ 1.32
XRCC3-217ENST00000556980 GIGYF2Q6Y7W6 1299 aaKnown RBP23.31■■□□□ 1.32
XRCC3-217ENST00000556980 COPS6Q7L5N1 327 aa23.31■■□□□ 1.32
XRCC3-217ENST00000556980 XAGE3Q8WTP9 111 aa23.31■■□□□ 1.32
XRCC3-217ENST00000556980 NYXQ9GZU5 481 aa23.31■■□□□ 1.32
XRCC3-217ENST00000556980 ADCY9O60503 1353 aa23.3■■□□□ 1.32
XRCC3-217ENST00000556980 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
XRCC3-217ENST00000556980 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
XRCC3-217ENST00000556980 DBF4Q9UBU7 674 aaPredicted RBP23.3■■□□□ 1.32
XRCC3-217ENST00000556980 ANKRD31Q8N7Z5 1873 aa23.3■■□□□ 1.32
XRCC3-217ENST00000556980 DLEC1Q9Y238 1755 aa23.29■■□□□ 1.32
XRCC3-217ENST00000556980 ARFGEF1Q9Y6D6 1849 aa23.29■■□□□ 1.32
XRCC3-217ENST00000556980 SRGNP10124 158 aa23.28■■□□□ 1.32
XRCC3-217ENST00000556980 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
XRCC3-217ENST00000556980 STYK1Q6J9G0 422 aa23.28■■□□□ 1.32
XRCC3-217ENST00000556980 UBN2Q6ZU65 1347 aa23.28■■□□□ 1.32
XRCC3-217ENST00000556980 ELL2O00472 640 aaPredicted RBP23.27■■□□□ 1.32
XRCC3-217ENST00000556980 ZNF34Q8IZ26 560 aa23.27■■□□□ 1.32
XRCC3-217ENST00000556980 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
XRCC3-217ENST00000556980 MASTLQ96GX5 879 aa23.27■■□□□ 1.32
XRCC3-217ENST00000556980 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.31
XRCC3-217ENST00000556980 COL11A2P13942 1736 aaPredicted RBP23.26■■□□□ 1.31
XRCC3-217ENST00000556980 TSR2Q969E8 191 aaKnown RBP23.26■■□□□ 1.31
XRCC3-217ENST00000556980 HYPKQ9NX55 129 aa23.26■■□□□ 1.31
XRCC3-217ENST00000556980 PARP10Q53GL7 1025 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 HSP90AB3PQ58FF7 597 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 SUSD4Q5VX71 490 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 NUTM1Q86Y26 1132 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 C8orf58Q8NAV2 365 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 ZNF526Q8TF50 670 aaPredicted RBP23.25■■□□□ 1.31
XRCC3-217ENST00000556980 SALL2Q9Y467 1007 aaPredicted RBP23.25■■□□□ 1.31
XRCC3-217ENST00000556980 ABCC12Q96J65 1359 aa23.25■■□□□ 1.31
XRCC3-217ENST00000556980 NPR1P16066 1061 aa23.24■■□□□ 1.31
XRCC3-217ENST00000556980 ERFEQ4G0M1 354 aa23.24■■□□□ 1.31
XRCC3-217ENST00000556980 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
XRCC3-217ENST00000556980 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
XRCC3-217ENST00000556980 PPP1R42Q7Z4L9 355 aa23.24■■□□□ 1.31
XRCC3-217ENST00000556980 IL16Q14005 1332 aa23.24■■□□□ 1.31
XRCC3-217ENST00000556980 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
XRCC3-217ENST00000556980 CHMP4AQ9BY43 222 aa23.23■■□□□ 1.31
XRCC3-217ENST00000556980 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
XRCC3-217ENST00000556980 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
XRCC3-217ENST00000556980 NUP98P52948 1817 aa23.23■■□□□ 1.31
XRCC3-217ENST00000556980 C21orf2O43822 256 aa23.22■■□□□ 1.31
XRCC3-217ENST00000556980 NTSR2O95665 410 aa23.22■■□□□ 1.31
XRCC3-217ENST00000556980 RASSF7Q02833 373 aa23.22■■□□□ 1.31
XRCC3-217ENST00000556980 PLBD2Q8NHP8 589 aa23.22■■□□□ 1.31
XRCC3-217ENST00000556980 RNF181Q9P0P0 153 aa23.22■■□□□ 1.31
XRCC3-217ENST00000556980 UTP14AQ9BVJ6 771 aaKnown RBP23.21■■□□□ 1.31
XRCC3-217ENST00000556980 TCIRG1Q13488 830 aa23.2■■□□□ 1.3
XRCC3-217ENST00000556980 CCDC30Q5VVM6 783 aa23.2■■□□□ 1.3
XRCC3-217ENST00000556980 ANKRD13DQ6ZTN6 518 aa23.2■■□□□ 1.3
XRCC3-217ENST00000556980 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
XRCC3-217ENST00000556980 RIC1Q4ADV7 1423 aa23.19■■□□□ 1.3
XRCC3-217ENST00000556980 WDR63Q8IWG1 891 aa23.19■■□□□ 1.3
XRCC3-217ENST00000556980 RNF123Q5XPI4 1314 aa23.18■■□□□ 1.3
XRCC3-217ENST00000556980 LMNB1P20700 586 aa23.18■■□□□ 1.3
XRCC3-217ENST00000556980 GOLGA2Q08379 1002 aa23.18■■□□□ 1.3
XRCC3-217ENST00000556980 CRY2Q49AN0 593 aa23.18■■□□□ 1.3
XRCC3-217ENST00000556980 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 458.9 ms