RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
SLIRP-207ENST00000556831 ADCY9O60503 1353 aa18.32■□□□□ 0.52
SLIRP-207ENST00000556831 GNAI1P63096 354 aa18.32■□□□□ 0.52
SLIRP-207ENST00000556831 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
SLIRP-207ENST00000556831 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
SLIRP-207ENST00000556831 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 CHL1O00533 1208 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
SLIRP-207ENST00000556831 KCNA3P22001 575 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 CHRNA5P30532 468 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
SLIRP-207ENST00000556831 ANXA1P04083 346 aa18.3■□□□□ 0.52
SLIRP-207ENST00000556831 MYL6BP14649 208 aa18.3■□□□□ 0.52
SLIRP-207ENST00000556831 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
SLIRP-207ENST00000556831 KLRG1Q96E93 195 aa18.3■□□□□ 0.52
SLIRP-207ENST00000556831 SERPINB2P05120 415 aa18.29■□□□□ 0.52
SLIRP-207ENST00000556831 TGFB2P61812 414 aa18.29■□□□□ 0.52
SLIRP-207ENST00000556831 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
SLIRP-207ENST00000556831 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
SLIRP-207ENST00000556831 SETDB2Q96T68 719 aa18.29■□□□□ 0.52
SLIRP-207ENST00000556831 HLFQ16534 295 aa18.28■□□□□ 0.52
SLIRP-207ENST00000556831 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
SLIRP-207ENST00000556831 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
SLIRP-207ENST00000556831 WDR90Q96KV7 1748 aa18.28■□□□□ 0.52
SLIRP-207ENST00000556831 HOXB7P09629 217 aa18.27■□□□□ 0.52
SLIRP-207ENST00000556831 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
SLIRP-207ENST00000556831 CLEC4GQ6UXB4 293 aa18.27■□□□□ 0.52
SLIRP-207ENST00000556831 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
SLIRP-207ENST00000556831 PDIA6Q15084 440 aa18.26■□□□□ 0.51
SLIRP-207ENST00000556831 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
SLIRP-207ENST00000556831 LRP10Q7Z4F1 713 aa18.26■□□□□ 0.51
SLIRP-207ENST00000556831 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
SLIRP-207ENST00000556831 PCNTO95613 3336 aa18.26■□□□□ 0.51
SLIRP-207ENST00000556831 RGL2O15211 777 aa18.25■□□□□ 0.51
SLIRP-207ENST00000556831 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
SLIRP-207ENST00000556831 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
SLIRP-207ENST00000556831 DLEC1Q9Y238 1755 aa18.25■□□□□ 0.51
SLIRP-207ENST00000556831 NUP98P52948 1817 aa18.24■□□□□ 0.51
SLIRP-207ENST00000556831 ST5P78524 1137 aa18.24■□□□□ 0.51
SLIRP-207ENST00000556831 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
SLIRP-207ENST00000556831 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
SLIRP-207ENST00000556831 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
SLIRP-207ENST00000556831 BCS1LQ9Y276 419 aa18.24■□□□□ 0.51
SLIRP-207ENST00000556831 KIF3CO14782 793 aa18.23■□□□□ 0.51
SLIRP-207ENST00000556831 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
SLIRP-207ENST00000556831 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
SLIRP-207ENST00000556831 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
SLIRP-207ENST00000556831 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
SLIRP-207ENST00000556831 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
SLIRP-207ENST00000556831 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
SLIRP-207ENST00000556831 ERVV-1B6SEH8 477 aa18.22■□□□□ 0.51
SLIRP-207ENST00000556831 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
SLIRP-207ENST00000556831 ZBTB3Q9H5J0 574 aa18.22■□□□□ 0.51
SLIRP-207ENST00000556831 IL16Q14005 1332 aa18.22■□□□□ 0.51
SLIRP-207ENST00000556831 TNRC6CQ9HCJ0 1690 aaKnown RBP18.22■□□□□ 0.51
SLIRP-207ENST00000556831 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
SLIRP-207ENST00000556831 CCER2I3L3R5 266 aa18.21■□□□□ 0.51
SLIRP-207ENST00000556831 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
SLIRP-207ENST00000556831 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
SLIRP-207ENST00000556831 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
SLIRP-207ENST00000556831 DBF4Q9UBU7 674 aaPredicted RBP18.21■□□□□ 0.51
SLIRP-207ENST00000556831 TOMM70O94826 608 aa18.2■□□□□ 0.5
SLIRP-207ENST00000556831 PDE6BP35913 854 aa18.2■□□□□ 0.5
SLIRP-207ENST00000556831 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
SLIRP-207ENST00000556831 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
SLIRP-207ENST00000556831 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
SLIRP-207ENST00000556831 H0YIN7 160 aa18.19■□□□□ 0.5
SLIRP-207ENST00000556831 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
SLIRP-207ENST00000556831 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
SLIRP-207ENST00000556831 WDR63Q8IWG1 891 aa18.19■□□□□ 0.5
SLIRP-207ENST00000556831 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
SLIRP-207ENST00000556831 PDZRN3Q9UPQ7 1066 aa18.19■□□□□ 0.5
SLIRP-207ENST00000556831 GPTP24298 496 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
SLIRP-207ENST00000556831 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
SLIRP-207ENST00000556831 ZNF428Q96B54 188 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 HYPKQ9NX55 129 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
SLIRP-207ENST00000556831 ABCC12Q96J65 1359 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 C8orf58Q8NAV2 365 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 BRIP1Q9BX63 1249 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
SLIRP-207ENST00000556831 CCDC30Q5VVM6 783 aa18.16■□□□□ 0.5
SLIRP-207ENST00000556831 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
SLIRP-207ENST00000556831 TSPYL6Q8N831 410 aa18.16■□□□□ 0.5
SLIRP-207ENST00000556831 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
SLIRP-207ENST00000556831 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
SLIRP-207ENST00000556831 NUTM1Q86Y26 1132 aa18.15■□□□□ 0.5
SLIRP-207ENST00000556831 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
SLIRP-207ENST00000556831 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 ARHGAP27Q6ZUM4 889 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
SLIRP-207ENST00000556831 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms