RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 DDX21Q9NR30 783 aaKnown RBP eCLIP13.61□□□□□ -0.23
SRSF5-216ENST00000556647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.231e-22■■■□□ 15.8
SRSF5-216ENST00000556647 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
SRSF5-216ENST00000556647 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
SRSF5-216ENST00000556647 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
SRSF5-216ENST00000556647 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
SRSF5-216ENST00000556647 CA12O43570 354 aa13.59□□□□□ -0.23
SRSF5-216ENST00000556647 FMR1Q06787 632 aaKnown RBP eCLIP13.59□□□□□ -0.23
SRSF5-216ENST00000556647 PNMA8AQ86V59 439 aaPredicted RBP13.59□□□□□ -0.23
SRSF5-216ENST00000556647 THSD7BQ9C0I4 1608 aa13.59□□□□□ -0.23
SRSF5-216ENST00000556647 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
SRSF5-216ENST00000556647 FYB1O15117 783 aa13.58□□□□□ -0.24
SRSF5-216ENST00000556647 CHRM1P11229 460 aaPredicted RBP13.58□□□□□ -0.24
SRSF5-216ENST00000556647 MAP2K2P36507 400 aa13.58□□□□□ -0.24
SRSF5-216ENST00000556647 CABP4P57796 275 aa13.58□□□□□ -0.24
SRSF5-216ENST00000556647 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.24
SRSF5-216ENST00000556647 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
SRSF5-216ENST00000556647 NRXN2Q9P2S2 1712 aa13.57□□□□□ -0.24
SRSF5-216ENST00000556647 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
SRSF5-216ENST00000556647 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
SRSF5-216ENST00000556647 EYA1Q99502 592 aa13.57□□□□□ -0.24
SRSF5-216ENST00000556647 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
SRSF5-216ENST00000556647 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
SRSF5-216ENST00000556647 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
SRSF5-216ENST00000556647 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
SRSF5-216ENST00000556647 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
SRSF5-216ENST00000556647 PDE6BP35913 854 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
SRSF5-216ENST00000556647 ADAMTS7Q9UKP4 1686 aa13.54□□□□□ -0.24
SRSF5-216ENST00000556647 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
SRSF5-216ENST00000556647 CST9Q5W186 159 aa13.54□□□□□ -0.24
SRSF5-216ENST00000556647 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
SRSF5-216ENST00000556647 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
SRSF5-216ENST00000556647 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
SRSF5-216ENST00000556647 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
SRSF5-216ENST00000556647 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
SRSF5-216ENST00000556647 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
SRSF5-216ENST00000556647 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
SRSF5-216ENST00000556647 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
SRSF5-216ENST00000556647 TRAF5O00463 557 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
SRSF5-216ENST00000556647 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
SRSF5-216ENST00000556647 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 PRPF40BQ6NWY9 871 aaKnown RBP13.52□□□□□ -0.25
SRSF5-216ENST00000556647 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 CNKSR1Q969H4 720 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 SLX4Q8IY92 1834 aa13.52□□□□□ -0.25
SRSF5-216ENST00000556647 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
SRSF5-216ENST00000556647 TJP1Q07157 1748 aa13.51□□□□□ -0.25
SRSF5-216ENST00000556647 NFATC2IPQ8NCF5 419 aa13.51□□□□□ -0.25
SRSF5-216ENST00000556647 ZNF277Q9NRM2 450 aaPredicted RBP13.51□□□□□ -0.25
SRSF5-216ENST00000556647 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
SRSF5-216ENST00000556647 COL15A1P39059 1388 aa13.5□□□□□ -0.25
SRSF5-216ENST00000556647 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
SRSF5-216ENST00000556647 NPHP1O15259 732 aa13.49□□□□□ -0.25
SRSF5-216ENST00000556647 MTHFSP49914 203 aa13.49□□□□□ -0.25
SRSF5-216ENST00000556647 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
SRSF5-216ENST00000556647 COL11A2P13942 1736 aaPredicted RBP13.49□□□□□ -0.25
SRSF5-216ENST00000556647 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
SRSF5-216ENST00000556647 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
SRSF5-216ENST00000556647 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
SRSF5-216ENST00000556647 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
SRSF5-216ENST00000556647 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
SRSF5-216ENST00000556647 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRSF5-216ENST00000556647 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
SRSF5-216ENST00000556647 GPC2Q8N158 579 aa13.47□□□□□ -0.25
SRSF5-216ENST00000556647 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
SRSF5-216ENST00000556647 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
SRSF5-216ENST00000556647 FZD9O00144 591 aa13.46□□□□□ -0.25
SRSF5-216ENST00000556647 SRGNP10124 158 aa13.46□□□□□ -0.25
SRSF5-216ENST00000556647 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.25
SRSF5-216ENST00000556647 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
SRSF5-216ENST00000556647 ZIC5Q96T25 663 aa13.46□□□□□ -0.25
SRSF5-216ENST00000556647 STK25O00506 426 aa13.45□□□□□ -0.26
SRSF5-216ENST00000556647 EPS15P42566 896 aa13.45□□□□□ -0.26
SRSF5-216ENST00000556647 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
SRSF5-216ENST00000556647 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
SRSF5-216ENST00000556647 KIF20BQ96Q89 1820 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 DLL1O00548 723 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
SRSF5-216ENST00000556647 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 C7orf43Q8WVR3 580 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 ZNF408Q9H9D4 720 aa13.44□□□□□ -0.26
SRSF5-216ENST00000556647 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
SRSF5-216ENST00000556647 NOGQ13253 232 aa13.43□□□□□ -0.26
SRSF5-216ENST00000556647 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
SRSF5-216ENST00000556647 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms