RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KDM5DQ9BY66 1539 aa20.44■□□□□ 0.86
PTPN21-208ENST00000556564 GSE1Q14687 1217 aa20.44■□□□□ 0.86
PTPN21-208ENST00000556564 SSBP05455 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN21-208ENST00000556564 LMBR1LQ6UX01 489 aa20.44■□□□□ 0.86
PTPN21-208ENST00000556564 CDCA7Q9BWT1 371 aaPredicted RBP20.44■□□□□ 0.86
PTPN21-208ENST00000556564 GRM8O00222 908 aa20.44■□□□□ 0.86
PTPN21-208ENST00000556564 CCDC82Q8N4S0 544 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
PTPN21-208ENST00000556564 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
PTPN21-208ENST00000556564 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 MRPL50Q8N5N7 158 aaKnown RBP20.43■□□□□ 0.86
PTPN21-208ENST00000556564 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 SPTY2D1Q68D10 685 aaPredicted RBP20.43■□□□□ 0.86
PTPN21-208ENST00000556564 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
PTPN21-208ENST00000556564 MYO1BO43795 1136 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 ECHDC1Q9NTX5 307 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 UGGT1Q9NYU2 1555 aa20.43■□□□□ 0.86
PTPN21-208ENST00000556564 EVI5LQ96CN4 794 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 STK32BQ9NY57 414 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 BAG3O95817 575 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 HECW2Q9P2P5 1572 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
PTPN21-208ENST00000556564 WASF1Q92558 559 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 WDHD1O75717 1129 aaPredicted RBP20.42■□□□□ 0.86
PTPN21-208ENST00000556564 LDHCP07864 332 aa20.42■□□□□ 0.86
PTPN21-208ENST00000556564 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
PTPN21-208ENST00000556564 EFCAB6Q5THR3 1501 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 MAGEC2Q9UBF1 373 aaPredicted RBP20.41■□□□□ 0.86
PTPN21-208ENST00000556564 CLEC11AQ9Y240 323 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 NPHP4O75161 1426 aaPredicted RBP20.41■□□□□ 0.86
PTPN21-208ENST00000556564 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
PTPN21-208ENST00000556564 FEZ1Q99689 392 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 IRS4O14654 1257 aaPredicted RBP20.41■□□□□ 0.86
PTPN21-208ENST00000556564 IQCA1Q86XH1 822 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
PTPN21-208ENST00000556564 MYCNP04198 464 aaPredicted RBP20.4■□□□□ 0.86
PTPN21-208ENST00000556564 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
PTPN21-208ENST00000556564 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
PTPN21-208ENST00000556564 RNF214Q8ND24 703 aa20.4■□□□□ 0.86
PTPN21-208ENST00000556564 OFD1O75665 1012 aa20.4■□□□□ 0.86
PTPN21-208ENST00000556564 GRM1Q13255 1194 aa20.4■□□□□ 0.86
PTPN21-208ENST00000556564 HOMER1Q86YM7 354 aa20.4■□□□□ 0.86
PTPN21-208ENST00000556564 HAND2P61296 217 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 BACH2Q9BYV9 841 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
PTPN21-208ENST00000556564 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 WDR33Q9C0J8 1336 aaKnown RBP20.39■□□□□ 0.85
PTPN21-208ENST00000556564 TMEM94Q12767 1356 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.85
PTPN21-208ENST00000556564 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 ATP2B3Q16720 1220 aa20.39■□□□□ 0.85
PTPN21-208ENST00000556564 PREX2Q70Z35 1606 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 GSTO1P78417 241 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 CTCFLQ8NI51 663 aaPredicted RBP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 FAM13BQ9NYF5 915 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 HLA-DOAP06340 250 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 MATR3P43243 847 aaKnown RBP eCLIP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 ZFYVE27Q5T4F4 411 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 RNF41Q9H4P4 317 aaPredicted RBP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 ODF2Q5BJF6 829 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 RBM26Q5T8P6 1007 aaKnown RBP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
PTPN21-208ENST00000556564 HELBQ8NG08 1087 aaPredicted RBP20.38■□□□□ 0.85
PTPN21-208ENST00000556564 SMC2O95347 1197 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 APBA3O96018 575 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 PICALMQ13492 652 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 CCDC144CPQ8IYA2 1237 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 ALDH1L1O75891 902 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 RHPN1Q8TCX5 695 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 LARP6Q9BRS8 491 aaKnown RBP20.37■□□□□ 0.85
PTPN21-208ENST00000556564 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
PTPN21-208ENST00000556564 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
PTPN21-208ENST00000556564 IL13P35225 146 aa20.36■□□□□ 0.85
PTPN21-208ENST00000556564 CYP7A1P22680 504 aa20.36■□□□□ 0.85
PTPN21-208ENST00000556564 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
PTPN21-208ENST00000556564 CABP5Q9NP86 173 aa20.36■□□□□ 0.85
PTPN21-208ENST00000556564 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
PTPN21-208ENST00000556564 KRT85P78386 507 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 GOLGA6L1Q8N7Z2 621 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 CRNKL1Q9BZJ0 848 aaKnown RBP20.35■□□□□ 0.85
PTPN21-208ENST00000556564 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 TSPY2A6NKD2 308 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 SPATA32Q96LK8 384 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 JAG2Q9Y219 1238 aa20.35■□□□□ 0.85
PTPN21-208ENST00000556564 CCDC70Q6NSX1 233 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 GUCY1B3Q02153 619 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
PTPN21-208ENST00000556564 GOLGA8AA7E2F4 631 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 GOLGA8BA8MQT2 603 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 LETM1O95202 739 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms