RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 SERPINB2P05120 415 aa13.49□□□□□ -0.25
HNRNPC-225ENST00000556513 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-225ENST00000556513 MYL6BP14649 208 aa13.48□□□□□ -0.25
HNRNPC-225ENST00000556513 CHRNA5P30532 468 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 CCDC24Q8N4L8 307 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 BCS1LQ9Y276 419 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 EIF2S2P20042 333 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 KCNA3P22001 575 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 SETDB2Q96T68 719 aa13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-225ENST00000556513 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
HNRNPC-225ENST00000556513 KRT24Q2M2I5 525 aa13.46□□□□□ -0.26
HNRNPC-225ENST00000556513 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.26
HNRNPC-225ENST00000556513 NECTIN2Q92692 538 aa13.46□□□□□ -0.26
HNRNPC-225ENST00000556513 CHL1O00533 1208 aa13.45□□□□□ -0.26
HNRNPC-225ENST00000556513 NPHP1O15259 732 aa13.45□□□□□ -0.26
HNRNPC-225ENST00000556513 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
HNRNPC-225ENST00000556513 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
HNRNPC-225ENST00000556513 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
HNRNPC-225ENST00000556513 ANXA1P04083 346 aa13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 CALD1Q05682 793 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 HLFQ16534 295 aa13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 ZNF784Q8NCA9 323 aaPredicted RBP13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
HNRNPC-225ENST00000556513 FAM177BA6PVY3 158 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 TTLL7Q6ZT98 887 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 SBF1O95248 1867 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
HNRNPC-225ENST00000556513 RGL2O15211 777 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 C2CD5Q86YS7 1000 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
HNRNPC-225ENST00000556513 ERBB4Q15303 1308 aa13.41□□□□□ -0.26
HNRNPC-225ENST00000556513 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
HNRNPC-225ENST00000556513 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
HNRNPC-225ENST00000556513 PDIA6Q15084 440 aa13.41□□□□□ -0.26
HNRNPC-225ENST00000556513 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-225ENST00000556513 H0YIN7 160 aa13.4□□□□□ -0.26
HNRNPC-225ENST00000556513 ST5P78524 1137 aa13.4□□□□□ -0.26
HNRNPC-225ENST00000556513 BRIP1Q9BX63 1249 aa13.4□□□□□ -0.26
HNRNPC-225ENST00000556513 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
HNRNPC-225ENST00000556513 SLX4Q8IY92 1834 aa13.4□□□□□ -0.27
HNRNPC-225ENST00000556513 HOXB7P09629 217 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 GPTP24298 496 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 PDE6BP35913 854 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 GNAI1P63096 354 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.271e-21■□□□□ 9
HNRNPC-225ENST00000556513 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 ARFGEF2Q9Y6D5 1785 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 ERVV-1B6SEH8 477 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 ELL2O00472 640 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
HNRNPC-225ENST00000556513 IL16Q14005 1332 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 GTF2E1P29083 439 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-225ENST00000556513 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
HNRNPC-225ENST00000556513 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-225ENST00000556513 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
HNRNPC-225ENST00000556513 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-225ENST00000556513 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
HNRNPC-225ENST00000556513 UBN2Q6ZU65 1347 aa13.36□□□□□ -0.27
HNRNPC-225ENST00000556513 FER1L6Q2WGJ9 1857 aa13.36□□□□□ -0.27
HNRNPC-225ENST00000556513 ADCY9O60503 1353 aa13.36□□□□□ -0.27
HNRNPC-225ENST00000556513 LAMB2P55268 1798 aa13.36□□□□□ -0.27
HNRNPC-225ENST00000556513 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 SRGNP10124 158 aa13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 DBF4Q9UBU7 674 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 ABCC12Q96J65 1359 aa13.35□□□□□ -0.27
HNRNPC-225ENST00000556513 RASSF7Q02833 373 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 SUSD4Q5VX71 490 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 ZNF428Q96B54 188 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
HNRNPC-225ENST00000556513 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms