RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
LRP1-210ENST00000556247 ARXQ96QS3 562 aa21.52■■□□□ 1.04
LRP1-210ENST00000556247 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
LRP1-210ENST00000556247 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
LRP1-210ENST00000556247 TRIM37O94972 964 aa21.51■■□□□ 1.03
LRP1-210ENST00000556247 GNAI2P04899 355 aa21.51■■□□□ 1.03
LRP1-210ENST00000556247 HDAC1Q13547 482 aaPredicted RBP21.51■■□□□ 1.03
LRP1-210ENST00000556247 INTS5Q6P9B9 1019 aaKnown RBP21.51■■□□□ 1.03
LRP1-210ENST00000556247 USP44Q9H0E7 712 aa21.51■■□□□ 1.03
LRP1-210ENST00000556247 CCNL1Q9UK58 526 aaPredicted RBP21.51■■□□□ 1.03
LRP1-210ENST00000556247 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
LRP1-210ENST00000556247 UBTFL1P0CB47 393 aaPredicted RBP21.5■■□□□ 1.03
LRP1-210ENST00000556247 ZBTB3Q9H5J0 574 aa21.5■■□□□ 1.03
LRP1-210ENST00000556247 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
LRP1-210ENST00000556247 RPAP2Q8IXW5 612 aaPredicted RBP21.49■■□□□ 1.03
LRP1-210ENST00000556247 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
LRP1-210ENST00000556247 HDAC5Q9UQL6 1122 aa21.49■■□□□ 1.03
LRP1-210ENST00000556247 LINC00116Q8NCU8 138 aa21.48■■□□□ 1.03
LRP1-210ENST00000556247 NEURL1BA8MQ27 555 aa21.47■■□□□ 1.03
LRP1-210ENST00000556247 IGKV5-2P06315 115 aa21.47■■□□□ 1.03
LRP1-210ENST00000556247 EIF5P55010 431 aaKnown RBP21.47■■□□□ 1.03
LRP1-210ENST00000556247 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
LRP1-210ENST00000556247 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
LRP1-210ENST00000556247 KCNQ4P56696 695 aa21.46■■□□□ 1.03
LRP1-210ENST00000556247 RC3H1Q5TC82 1133 aaKnown RBP21.46■■□□□ 1.03
LRP1-210ENST00000556247 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
LRP1-210ENST00000556247 ANKRD44Q8N8A2 993 aa21.46■■□□□ 1.03
LRP1-210ENST00000556247 ATP5J2-PTCD1G3V325 749 aa21.45■■□□□ 1.02
LRP1-210ENST00000556247 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
LRP1-210ENST00000556247 CNTNAP4Q9C0A0 1308 aa21.45■■□□□ 1.02
LRP1-210ENST00000556247 IBTKQ9P2D0 1353 aaPredicted RBP21.45■■□□□ 1.02
LRP1-210ENST00000556247 A0A087WZG4 1122 aa21.44■■□□□ 1.02
LRP1-210ENST00000556247 GRM8O00222 908 aa21.44■■□□□ 1.02
LRP1-210ENST00000556247 NBPF7P0C2Y1 421 aaPredicted RBP21.44■■□□□ 1.02
LRP1-210ENST00000556247 TCIRG1Q13488 830 aa21.44■■□□□ 1.02
LRP1-210ENST00000556247 GCKRQ14397 625 aa21.44■■□□□ 1.02
LRP1-210ENST00000556247 LRRFIP2Q9Y608 721 aaKnown RBP21.44■■□□□ 1.02
LRP1-210ENST00000556247 RREB1Q92766 1687 aa21.44■■□□□ 1.02
LRP1-210ENST00000556247 LY75O60449 1722 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
LRP1-210ENST00000556247 ERVV-1B6SEH8 477 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 HMMRO75330 724 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 HSP90AB3PQ58FF7 597 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 GIGYF2Q6Y7W6 1299 aaKnown RBP21.43■■□□□ 1.02
LRP1-210ENST00000556247 SIRT2Q8IXJ6 389 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
LRP1-210ENST00000556247 UTYO14607 1347 aa21.42■■□□□ 1.02
LRP1-210ENST00000556247 HMGB2P26583 209 aaKnown RBP21.42■■□□□ 1.02
LRP1-210ENST00000556247 ATP8B2P98198 1209 aa21.42■■□□□ 1.02
LRP1-210ENST00000556247 SLC27A3Q5K4L6 730 aa21.42■■□□□ 1.02
LRP1-210ENST00000556247 NUP188Q5SRE5 1749 aa21.42■■□□□ 1.02
LRP1-210ENST00000556247 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
LRP1-210ENST00000556247 CCDC191Q8NCU4 936 aa21.41■■□□□ 1.02
LRP1-210ENST00000556247 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
LRP1-210ENST00000556247 RPS6KA4O75676 772 aa21.4■■□□□ 1.02
LRP1-210ENST00000556247 APBA3O96018 575 aa21.4■■□□□ 1.02
LRP1-210ENST00000556247 HLFQ16534 295 aa21.4■■□□□ 1.02
LRP1-210ENST00000556247 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
LRP1-210ENST00000556247 ISCA1Q9BUE6 129 aa21.4■■□□□ 1.02
LRP1-210ENST00000556247 COL15A1P39059 1388 aa21.39■■□□□ 1.02
LRP1-210ENST00000556247 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.02
LRP1-210ENST00000556247 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
LRP1-210ENST00000556247 ILDR1Q86SU0 546 aaPredicted RBP21.39■■□□□ 1.01
LRP1-210ENST00000556247 SMC5Q8IY18 1101 aa21.39■■□□□ 1.01
LRP1-210ENST00000556247 PLSCR1O15162 318 aa21.37■■□□□ 1.01
LRP1-210ENST00000556247 GNPATO15228 680 aa21.37■■□□□ 1.01
LRP1-210ENST00000556247 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
LRP1-210ENST00000556247 AK7Q96M32 723 aa21.37■■□□□ 1.01
LRP1-210ENST00000556247 LRRC4BQ9NT99 713 aa21.37■■□□□ 1.01
LRP1-210ENST00000556247 RTCBQ9Y3I0 505 aaKnown RBP21.37■■□□□ 1.01
LRP1-210ENST00000556247 H7C1W4 665 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 TXNRD1Q16881 649 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 DCTPP1Q9H773 170 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
LRP1-210ENST00000556247 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
LRP1-210ENST00000556247 JARID2Q92833 1246 aaPredicted RBP21.35■■□□□ 1.01
LRP1-210ENST00000556247 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
LRP1-210ENST00000556247 PNMA6EA0A0J9YXQ4 647 aa21.34■■□□□ 1.01
LRP1-210ENST00000556247 GPTP24298 496 aa21.34■■□□□ 1.01
LRP1-210ENST00000556247 SRGAP3O43295 1099 aa21.33■■□□□ 1.01
LRP1-210ENST00000556247 NLRP10Q86W26 655 aa21.33■■□□□ 1.01
LRP1-210ENST00000556247 ZNF34Q8IZ26 560 aa21.33■■□□□ 1.01
LRP1-210ENST00000556247 SSH3Q8TE77 659 aa21.33■■□□□ 1.01
LRP1-210ENST00000556247 ZBTB47Q9UFB7 747 aaPredicted RBP21.33■■□□□ 1.01
LRP1-210ENST00000556247 C4BP0C0L5 1744 aa21.32■■□□□ 1
LRP1-210ENST00000556247 NUP98P52948 1817 aa21.32■■□□□ 1
LRP1-210ENST00000556247 CASP7P55210 303 aa21.32■■□□□ 1
LRP1-210ENST00000556247 MTX1Q13505 466 aa21.32■■□□□ 1
LRP1-210ENST00000556247 ANKRD45Q5TZF3 282 aa21.32■■□□□ 1
LRP1-210ENST00000556247 CLEC4GQ6UXB4 293 aa21.32■■□□□ 1
LRP1-210ENST00000556247 BICC1Q9H694 974 aaKnown RBP21.32■■□□□ 1
LRP1-210ENST00000556247 RGL2O15211 777 aa21.31■■□□□ 1
LRP1-210ENST00000556247 ZPR1O75312 459 aa21.31■■□□□ 1
LRP1-210ENST00000556247 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
LRP1-210ENST00000556247 NUCB1Q02818 461 aa21.31■■□□□ 1
LRP1-210ENST00000556247 POLA2Q14181 598 aa21.31■■□□□ 1
LRP1-210ENST00000556247 TRAPPC3LQ5T215 181 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms