RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 NBPF15Q8N660 670 aa28.51■■■□□ 2.15
SDR39U1-216ENST00000556175 NBPF5PQ86XG9 351 aaPredicted RBP28.5■■■□□ 2.15
SDR39U1-216ENST00000556175 CCDC24Q8N4L8 307 aa28.5■■■□□ 2.15
SDR39U1-216ENST00000556175 TNRC6CQ9HCJ0 1690 aaKnown RBP28.5■■■□□ 2.15
SDR39U1-216ENST00000556175 CNKSR1Q969H4 720 aa28.49■■■□□ 2.15
SDR39U1-216ENST00000556175 STYK1Q6J9G0 422 aa28.48■■■□□ 2.15
SDR39U1-216ENST00000556175 RBM46Q8TBY0 533 aaKnown RBP28.47■■■□□ 2.15
SDR39U1-216ENST00000556175 NIP7Q9Y221 180 aaKnown RBP eCLIP28.46■■■□□ 2.15
SDR39U1-216ENST00000556175 NFKBIEO00221 500 aa28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 SRGNP10124 158 aa28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 EIF4A1P60842 406 aaKnown RBP28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 TPTE2Q6XPS3 522 aa28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 MASTLQ96GX5 879 aa28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 THUMPD2Q9BTF0 503 aaKnown RBP28.45■■■□□ 2.14
SDR39U1-216ENST00000556175 TIAM2Q8IVF5 1701 aa28.44■■■□□ 2.14
SDR39U1-216ENST00000556175 C21orf2O43822 256 aa28.44■■■□□ 2.14
SDR39U1-216ENST00000556175 APLP1P51693 650 aa28.44■■■□□ 2.14
SDR39U1-216ENST00000556175 SOGA3Q5TF21 947 aa28.44■■■□□ 2.14
SDR39U1-216ENST00000556175 MYBBP1AQ9BQG0 1328 aaKnown RBP28.43■■■□□ 2.14
SDR39U1-216ENST00000556175 ARFGEF2Q9Y6D5 1785 aa28.43■■■□□ 2.14
SDR39U1-216ENST00000556175 DDX10Q13206 875 aaKnown RBP28.43■■■□□ 2.14
SDR39U1-216ENST00000556175 LMOD3Q0VAK6 560 aa28.42■■■□□ 2.14
SDR39U1-216ENST00000556175 RRAGCQ9HB90 399 aa28.42■■■□□ 2.14
SDR39U1-216ENST00000556175 FER1L6Q2WGJ9 1857 aa28.41■■■□□ 2.14
SDR39U1-216ENST00000556175 PRELPP51888 382 aa28.41■■■□□ 2.14
SDR39U1-216ENST00000556175 PRPF40BQ6NWY9 871 aaKnown RBP28.41■■■□□ 2.14
SDR39U1-216ENST00000556175 ZNF219Q9P2Y4 722 aaPredicted RBP28.41■■■□□ 2.14
SDR39U1-216ENST00000556175 LTBP3Q9NS15 1303 aa28.41■■■□□ 2.14
SDR39U1-216ENST00000556175 GLTPD2A6NH11 291 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 ERVV-1B6SEH8 477 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 RIPK4P57078 832 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 FSTL1Q12841 308 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 KIF6Q6ZMV9 814 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 TAOK3Q9H2K8 898 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 CCDC88AQ3V6T2 1871 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 ERBB4Q15303 1308 aa28.4■■■□□ 2.14
SDR39U1-216ENST00000556175 NPR1P16066 1061 aa28.39■■■□□ 2.14
SDR39U1-216ENST00000556175 HLFQ16534 295 aa28.39■■■□□ 2.14
SDR39U1-216ENST00000556175 BABAM1Q9NWV8 329 aa28.39■■■□□ 2.14
SDR39U1-216ENST00000556175 TSPYL4Q9UJ04 414 aa28.39■■■□□ 2.14
SDR39U1-216ENST00000556175 RRP7AQ9Y3A4 280 aaKnown RBP28.38■■■□□ 2.13
SDR39U1-216ENST00000556175 SLX4Q8IY92 1834 aa28.38■■■□□ 2.13
SDR39U1-216ENST00000556175 MAP3K15Q6ZN16 1313 aa28.38■■■□□ 2.13
SDR39U1-216ENST00000556175 CACNA1SQ13698 1873 aa28.38■■■□□ 2.13
SDR39U1-216ENST00000556175 KLRG2A4D1S0 409 aaPredicted RBP28.37■■■□□ 2.13
SDR39U1-216ENST00000556175 GTF2E1P29083 439 aaPredicted RBP28.37■■■□□ 2.13
SDR39U1-216ENST00000556175 NGEFQ8N5V2 710 aa28.37■■■□□ 2.13
SDR39U1-216ENST00000556175 NYXQ9GZU5 481 aa28.37■■■□□ 2.13
SDR39U1-216ENST00000556175 DPY19L2Q6NUT2 758 aa28.36■■■□□ 2.13
SDR39U1-216ENST00000556175 DICER1Q9UPY3 1922 aaKnown RBP28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 FAM177BA6PVY3 158 aa28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 MYL6BP14649 208 aa28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 VEGFAP15692 232 aaPredicted RBP28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 TMPOP42166 694 aaKnown RBP28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 ERFEQ4G0M1 354 aa28.35■■■□□ 2.13
SDR39U1-216ENST00000556175 SMC1BQ8NDV3 1235 aa28.34■■■□□ 2.13
SDR39U1-216ENST00000556175 NUP98P52948 1817 aa28.34■■■□□ 2.13
SDR39U1-216ENST00000556175 WDR43Q15061 677 aaKnown RBP eCLIP28.33■■■□□ 2.13
SDR39U1-216ENST00000556175 CCDC93Q567U6 631 aa28.33■■■□□ 2.13
SDR39U1-216ENST00000556175 IBTKQ9P2D0 1353 aaPredicted RBP28.33■■■□□ 2.13
SDR39U1-216ENST00000556175 TTLL7Q6ZT98 887 aa28.32■■■□□ 2.12
SDR39U1-216ENST00000556175 ALDH1B1P30837 517 aa28.31■■■□□ 2.12
SDR39U1-216ENST00000556175 WDR90Q96KV7 1748 aa28.3■■■□□ 2.12
SDR39U1-216ENST00000556175 C7orf43Q8WVR3 580 aa28.3■■■□□ 2.12
SDR39U1-216ENST00000556175 ZBTB3Q9H5J0 574 aa28.3■■■□□ 2.12
SDR39U1-216ENST00000556175 RUNDC1Q96C34 613 aa28.29■■■□□ 2.12
SDR39U1-216ENST00000556175 RIC1Q4ADV7 1423 aa28.28■■■□□ 2.12
SDR39U1-216ENST00000556175 GIGYF2Q6Y7W6 1299 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-216ENST00000556175 CCDC146Q8IYE0 955 aa28.27■■■□□ 2.12
SDR39U1-216ENST00000556175 ABCC12Q96J65 1359 aa28.26■■■□□ 2.12
SDR39U1-216ENST00000556175 EIF2S2P20042 333 aaKnown RBP28.26■■■□□ 2.11
SDR39U1-216ENST00000556175 CRY2Q49AN0 593 aa28.26■■■□□ 2.11
SDR39U1-216ENST00000556175 RTKN2Q8IZC4 609 aa28.26■■■□□ 2.11
SDR39U1-216ENST00000556175 GPTP24298 496 aa28.25■■■□□ 2.11
SDR39U1-216ENST00000556175 FKBP4Q02790 459 aaKnown RBP eCLIP28.25■■■□□ 2.11
SDR39U1-216ENST00000556175 NEUROD2Q15784 382 aa28.25■■■□□ 2.11
SDR39U1-216ENST00000556175 NUTM1Q86Y26 1132 aa28.25■■■□□ 2.11
SDR39U1-216ENST00000556175 ZNF34Q8IZ26 560 aa28.25■■■□□ 2.11
SDR39U1-216ENST00000556175 UBN2Q6ZU65 1347 aa28.24■■■□□ 2.11
SDR39U1-216ENST00000556175 PARP10Q53GL7 1025 aa28.24■■■□□ 2.11
SDR39U1-216ENST00000556175 PDIA6Q15084 440 aa28.23■■■□□ 2.11
SDR39U1-216ENST00000556175 PPP1R42Q7Z4L9 355 aa28.23■■■□□ 2.11
SDR39U1-216ENST00000556175 DNAJC5GQ8N7S2 189 aa28.23■■■□□ 2.11
SDR39U1-216ENST00000556175 RPGRQ92834 1020 aaKnown RBP28.23■■■□□ 2.11
SDR39U1-216ENST00000556175 LRP10Q7Z4F1 713 aa28.22■■■□□ 2.11
SDR39U1-216ENST00000556175 CHL1O00533 1208 aa28.21■■■□□ 2.11
SDR39U1-216ENST00000556175 SUSD4Q5VX71 490 aa28.21■■■□□ 2.11
SDR39U1-216ENST00000556175 PRKRIP1Q9H875 184 aaPredicted RBP28.21■■■□□ 2.11
SDR39U1-216ENST00000556175 POTECB2RU33 542 aa28.2■■■□□ 2.1
SDR39U1-216ENST00000556175 CC2D2BQ6DHV5 1058 aa28.2■■■□□ 2.1
SDR39U1-216ENST00000556175 ADAMTS8Q9UP79 889 aa28.2■■■□□ 2.1
SDR39U1-216ENST00000556175 TRIM35Q9UPQ4 493 aa28.2■■■□□ 2.1
SDR39U1-216ENST00000556175 NTSR2O95665 410 aa28.19■■■□□ 2.1
SDR39U1-216ENST00000556175 HOXA10P31260 410 aaPredicted RBP28.19■■■□□ 2.1
SDR39U1-216ENST00000556175 HSP90AB3PQ58FF7 597 aa28.19■■■□□ 2.1
SDR39U1-216ENST00000556175 RNF123Q5XPI4 1314 aa28.18■■■□□ 2.1
SDR39U1-216ENST00000556175 PROSER3Q2NL68 480 aa28.18■■■□□ 2.1
SDR39U1-216ENST00000556175 GRIPAP1Q4V328 841 aa28.18■■■□□ 2.1
SDR39U1-216ENST00000556175 ZNF277Q9NRM2 450 aaPredicted RBP28.18■■■□□ 2.1
SDR39U1-216ENST00000556175 LAS1LQ9Y4W2 734 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms