RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 RASSF7Q02833 373 aa22.62■■□□□ 1.21
GPHN-211ENST00000556020 TSPYL4Q9UJ04 414 aa22.62■■□□□ 1.21
GPHN-211ENST00000556020 CACNA1SQ13698 1873 aa22.62■■□□□ 1.21
GPHN-211ENST00000556020 NBPF5PQ86XG9 351 aaPredicted RBP22.61■■□□□ 1.21
GPHN-211ENST00000556020 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
GPHN-211ENST00000556020 FAM177BA6PVY3 158 aa22.6■■□□□ 1.21
GPHN-211ENST00000556020 CLEC4GQ6UXB4 293 aa22.6■■□□□ 1.21
GPHN-211ENST00000556020 NIP7Q9Y221 180 aaKnown RBP eCLIP22.6■■□□□ 1.21
GPHN-211ENST00000556020 MYL6BP14649 208 aa22.59■■□□□ 1.21
GPHN-211ENST00000556020 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
GPHN-211ENST00000556020 KIF3CO14782 793 aa22.58■■□□□ 1.21
GPHN-211ENST00000556020 HLFQ16534 295 aa22.58■■□□□ 1.21
GPHN-211ENST00000556020 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.2
GPHN-211ENST00000556020 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
GPHN-211ENST00000556020 NMRK2Q9NPI5 230 aa22.57■■□□□ 1.2
GPHN-211ENST00000556020 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
GPHN-211ENST00000556020 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
GPHN-211ENST00000556020 ADAMTS8Q9UP79 889 aa22.56■■□□□ 1.2
GPHN-211ENST00000556020 NUP98P52948 1817 aa22.56■■□□□ 1.2
GPHN-211ENST00000556020 C21orf2O43822 256 aa22.55■■□□□ 1.2
GPHN-211ENST00000556020 EIF2S2P20042 333 aaKnown RBP22.55■■□□□ 1.2
GPHN-211ENST00000556020 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
GPHN-211ENST00000556020 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
GPHN-211ENST00000556020 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
GPHN-211ENST00000556020 SLX4Q8IY92 1834 aa22.54■■□□□ 1.2
GPHN-211ENST00000556020 LMNB1P20700 586 aa22.53■■□□□ 1.2
GPHN-211ENST00000556020 TPTE2Q6XPS3 522 aa22.53■■□□□ 1.2
GPHN-211ENST00000556020 ZBTB3Q9H5J0 574 aa22.53■■□□□ 1.2
GPHN-211ENST00000556020 TIAM2Q8IVF5 1701 aa22.53■■□□□ 1.2
GPHN-211ENST00000556020 MAP3K15Q6ZN16 1313 aa22.53■■□□□ 1.2
GPHN-211ENST00000556020 NFKBIEO00221 500 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 SRGNP10124 158 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 GTF2E1P29083 439 aaPredicted RBP22.52■■□□□ 1.2
GPHN-211ENST00000556020 PRELPP51888 382 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 STYK1Q6J9G0 422 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 CNKSR1Q969H4 720 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 MASTLQ96GX5 879 aa22.52■■□□□ 1.2
GPHN-211ENST00000556020 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
GPHN-211ENST00000556020 RGL2O15211 777 aa22.51■■□□□ 1.19
GPHN-211ENST00000556020 PRPF40BQ6NWY9 871 aaKnown RBP22.51■■□□□ 1.19
GPHN-211ENST00000556020 NECTIN2Q92692 538 aa22.51■■□□□ 1.19
GPHN-211ENST00000556020 KDM2BQ8NHM5 1336 aa22.51■■□□□ 1.19
GPHN-211ENST00000556020 ERVV-1B6SEH8 477 aa22.5■■□□□ 1.19
GPHN-211ENST00000556020 GPTP24298 496 aa22.5■■□□□ 1.19
GPHN-211ENST00000556020 BABAM1Q9NWV8 329 aa22.5■■□□□ 1.19
GPHN-211ENST00000556020 TRIM35Q9UPQ4 493 aa22.5■■□□□ 1.19
GPHN-211ENST00000556020 FER1L6Q2WGJ9 1857 aa22.49■■□□□ 1.19
GPHN-211ENST00000556020 ANXA1P04083 346 aa22.49■■□□□ 1.19
GPHN-211ENST00000556020 ERBB4Q15303 1308 aa22.49■■□□□ 1.19
GPHN-211ENST00000556020 PROSER3Q2NL68 480 aa22.48■■□□□ 1.19
GPHN-211ENST00000556020 NUTM1Q86Y26 1132 aa22.48■■□□□ 1.19
GPHN-211ENST00000556020 C16orf71Q8IYS4 520 aaPredicted RBP22.48■■□□□ 1.19
GPHN-211ENST00000556020 RRAGCQ9HB90 399 aa22.48■■□□□ 1.19
GPHN-211ENST00000556020 TNRC6CQ9HCJ0 1690 aaKnown RBP22.48■■□□□ 1.19
GPHN-211ENST00000556020 TOMM70O94826 608 aa22.47■■□□□ 1.19
GPHN-211ENST00000556020 NPR1P16066 1061 aa22.47■■□□□ 1.19
GPHN-211ENST00000556020 HSPA6P17066 643 aa22.47■■□□□ 1.19
GPHN-211ENST00000556020 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
GPHN-211ENST00000556020 KRT24Q2M2I5 525 aa22.47■■□□□ 1.19
GPHN-211ENST00000556020 NYXQ9GZU5 481 aa22.46■■□□□ 1.19
GPHN-211ENST00000556020 TAOK3Q9H2K8 898 aa22.46■■□□□ 1.19
GPHN-211ENST00000556020 CHL1O00533 1208 aa22.45■■□□□ 1.18
GPHN-211ENST00000556020 PDIA6Q15084 440 aa22.45■■□□□ 1.18
GPHN-211ENST00000556020 ERFEQ4G0M1 354 aa22.45■■□□□ 1.18
GPHN-211ENST00000556020 UBN2Q6ZU65 1347 aa22.45■■□□□ 1.18
GPHN-211ENST00000556020 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
GPHN-211ENST00000556020 ABCC12Q96J65 1359 aa22.45■■□□□ 1.18
GPHN-211ENST00000556020 AIMP1Q12904 312 aaKnown RBP22.44■■□□□ 1.18
GPHN-211ENST00000556020 DICER1Q9UPY3 1922 aaKnown RBP22.44■■□□□ 1.18
GPHN-211ENST00000556020 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
GPHN-211ENST00000556020 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
GPHN-211ENST00000556020 SUSD4Q5VX71 490 aa22.43■■□□□ 1.18
GPHN-211ENST00000556020 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
GPHN-211ENST00000556020 APAF1O14727 1248 aa22.42■■□□□ 1.18
GPHN-211ENST00000556020 LRP10Q7Z4F1 713 aa22.42■■□□□ 1.18
GPHN-211ENST00000556020 ZNF34Q8IZ26 560 aa22.42■■□□□ 1.18
GPHN-211ENST00000556020 GLTPD2A6NH11 291 aa22.41■■□□□ 1.18
GPHN-211ENST00000556020 OLFM4Q6UX06 510 aa22.41■■□□□ 1.18
GPHN-211ENST00000556020 COPS6Q7L5N1 327 aa22.41■■□□□ 1.18
GPHN-211ENST00000556020 XAGE3Q8WTP9 111 aa22.41■■□□□ 1.18
GPHN-211ENST00000556020 CCDC93Q567U6 631 aa22.4■■□□□ 1.18
GPHN-211ENST00000556020 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
GPHN-211ENST00000556020 LTBP3Q9NS15 1303 aa22.39■■□□□ 1.18
GPHN-211ENST00000556020 ALDH1B1P30837 517 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 RBM46Q8TBY0 533 aaKnown RBP22.39■■□□□ 1.17
GPHN-211ENST00000556020 C7orf43Q8WVR3 580 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.17
GPHN-211ENST00000556020 CFAP44Q96MT7 982 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 CHPF2Q9P2E5 772 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 CEP350Q5VT06 3117 aa22.39■■□□□ 1.17
GPHN-211ENST00000556020 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
GPHN-211ENST00000556020 NTSR2O95665 410 aa22.38■■□□□ 1.17
GPHN-211ENST00000556020 CCDC184Q52MB2 194 aa22.38■■□□□ 1.17
GPHN-211ENST00000556020 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
GPHN-211ENST00000556020 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
GPHN-211ENST00000556020 PARP10Q53GL7 1025 aa22.37■■□□□ 1.17
GPHN-211ENST00000556020 DPY19L2Q6NUT2 758 aa22.37■■□□□ 1.17
GPHN-211ENST00000556020 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
GPHN-211ENST00000556020 VEGFAP15692 232 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms