RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ATXN7O15265 892 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-213ENST00000554776 OCLNQ16625 522 aa5.97□□□□□ -1.45
SCFD1-213ENST00000554776 ALDH16A1Q8IZ83 802 aa5.97□□□□□ -1.45
SCFD1-213ENST00000554776 KLRG1Q96E93 195 aa5.97□□□□□ -1.45
SCFD1-213ENST00000554776 ABHD17AQ96GS6 310 aa5.97□□□□□ -1.45
SCFD1-213ENST00000554776 IGF1RP08069 1367 aa5.96□□□□□ -1.45
SCFD1-213ENST00000554776 ADAMTS2O95450 1211 aa5.96□□□□□ -1.46
SCFD1-213ENST00000554776 FAM157BP0CG42 384 aa5.96□□□□□ -1.46
SCFD1-213ENST00000554776 MX2P20592 715 aa5.96□□□□□ -1.46
SCFD1-213ENST00000554776 TNP2Q05952 138 aa5.96□□□□□ -1.46
SCFD1-213ENST00000554776 CLP1Q92989 425 aaKnown RBP5.96□□□□□ -1.46
SCFD1-213ENST00000554776 GJA3Q9Y6H8 435 aa5.96□□□□□ -1.46
SCFD1-213ENST00000554776 EFSO43281 561 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 PRMT3O60678 531 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 MAPTP10636 758 aaKnown RBP5.95□□□□□ -1.46
SCFD1-213ENST00000554776 FGFR3P22607 806 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 FKBP5Q13451 457 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-213ENST00000554776 RTN1Q16799 776 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 LRRC69Q6ZNQ3 347 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 HOMEZQ8IX15 550 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 NGLY1Q96IV0 654 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 STK17AQ9UEE5 414 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 HCN2Q9UL51 889 aa5.95□□□□□ -1.46
SCFD1-213ENST00000554776 NSFL1CQ9UNZ2 370 aaKnown RBP5.95□□□□□ -1.46
SCFD1-213ENST00000554776 DCDC2BA2VCK2 349 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 TMEM88BA6NKF7 163 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 MAP2K3P46734 347 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 LAMC2Q13753 1193 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 HIF1AQ16665 826 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 FAM182BQ5T319 152 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 ZNF385CQ66K41 422 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-213ENST00000554776 WHAMMQ8TF30 809 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 HSH2DQ96JZ2 352 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 SUSD3Q96L08 255 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 QTRT2Q9H974 415 aaKnown RBP5.94□□□□□ -1.46
SCFD1-213ENST00000554776 NEUROD4Q9HD90 331 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 CXXC1Q9P0U4 656 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-213ENST00000554776 SLAIN2Q9P270 581 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 ANKIB1Q9P2G1 1089 aa5.94□□□□□ -1.46
SCFD1-213ENST00000554776 C2CD2LO14523 706 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 KHNYNO15037 678 aaKnown RBP5.93□□□□□ -1.46
SCFD1-213ENST00000554776 CTBSQ01459 385 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 ZNF280CQ8ND82 737 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 COL26A1Q96A83 441 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 MYO19Q96H55 970 aa5.93□□□□□ -1.46
SCFD1-213ENST00000554776 BMP4P12644 408 aa5.92□□□□□ -1.46
SCFD1-213ENST00000554776 LYPD4Q6UWN0 246 aa5.92□□□□□ -1.46
SCFD1-213ENST00000554776 RETREG2Q8NC44 543 aa5.92□□□□□ -1.46
SCFD1-213ENST00000554776 ACDQ96AP0 544 aa5.92□□□□□ -1.46
SCFD1-213ENST00000554776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCFD1-213ENST00000554776 STRN4Q9NRL3 753 aa5.92□□□□□ -1.46
SCFD1-213ENST00000554776 FAM181BA6NEQ2 426 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 TGFBR3LH3BV60 316 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 CELA2BP08218 269 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-213ENST00000554776 CD33P20138 364 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 TYRO3Q06418 890 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 IER5Q5VY09 327 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 SVOPQ8N4V2 548 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 OXCT2Q9BYC2 517 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-213ENST00000554776 LRRC4BQ9NT99 713 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 MARK1Q9P0L2 795 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 DMGDHQ9UI17 866 aaKnown RBP5.91□□□□□ -1.46
SCFD1-213ENST00000554776 BCS1LQ9Y276 419 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 USTQ9Y2C2 406 aa5.91□□□□□ -1.46
SCFD1-213ENST00000554776 PTCD1O75127 700 aaKnown RBP5.9□□□□□ -1.46
SCFD1-213ENST00000554776 ARHGEF15O94989 841 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 ATP2B4P23634 1241 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 KCNQ4P56696 695 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 BTLAQ7Z6A9 289 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 CEP63Q96MT8 703 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 BRD7Q9NPI1 651 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 KLK14Q9P0G3 267 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 LRFN2Q9ULH4 789 aa5.9□□□□□ -1.46
SCFD1-213ENST00000554776 CARNS1A5YM72 827 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 ARAFP10398 606 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 BCRP11274 1271 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 SFSWAPQ12872 951 aaKnown RBP5.89□□□□□ -1.47
SCFD1-213ENST00000554776 DGKZQ13574 1117 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 COX20Q5RI15 118 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 MKNK1Q9BUB5 465 aa5.89□□□□□ -1.47
SCFD1-213ENST00000554776 AVENQ9NQS1 362 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-213ENST00000554776 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-213ENST00000554776 OIP5O43482 229 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 MAP3K10Q02779 954 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 GRIN2CQ14957 1233 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 ZNF468Q5VIY5 522 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-213ENST00000554776 C16orf46Q6P387 395 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 SLCO4C1Q6ZQN7 724 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 GOLGA6L1Q8N7Z2 621 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 SAP130Q9H0E3 1048 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 KCNH4Q9UQ05 1017 aa5.88□□□□□ -1.47
SCFD1-213ENST00000554776 SSFA2P28290 1259 aa5.87□□□□□ -1.47
SCFD1-213ENST00000554776 C1orf229Q6ZS94 237 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-213ENST00000554776 KLF15Q9UIH9 416 aa5.87□□□□□ -1.47
SCFD1-213ENST00000554776 GGA1Q9UJY5 639 aa5.87□□□□□ -1.47
SCFD1-213ENST00000554776 ADAMTS8Q9UP79 889 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms