RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
CCNK-203ENST00000553865 CASTP20810 708 aaKnown RBP10.66□□□□□ -0.7
CCNK-203ENST00000553865 STIM1Q13586 685 aa10.66□□□□□ -0.7
CCNK-203ENST00000553865 SH2B1Q9NRF2 756 aaPredicted RBP10.66□□□□□ -0.7
CCNK-203ENST00000553865 FAM107BQ9H098 131 aa10.66□□□□□ -0.7
CCNK-203ENST00000553865 MBIPQ9NS73 344 aa10.66□□□□□ -0.7
CCNK-203ENST00000553865 DIP2BQ9P265 1576 aa10.66□□□□□ -0.7
CCNK-203ENST00000553865 CCDC91Q7Z6B0 441 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 GBP3Q9H0R5 595 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 NUP62CLQ9H1M0 184 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 ME1P48163 572 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
CCNK-203ENST00000553865 FAM193AP78312 1265 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 SERPINC1P01008 464 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 TICAM2Q86XR7 235 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 DNAAF4Q8WXU2 420 aa10.65□□□□□ -0.7
CCNK-203ENST00000553865 NOL7Q9UMY1 257 aaKnown RBP10.65□□□□□ -0.7
CCNK-203ENST00000553865 ESPNB1AK53 854 aa10.65□□□□□ -0.71
CCNK-203ENST00000553865 KRT18P05783 430 aaKnown RBP10.65□□□□□ -0.71
CCNK-203ENST00000553865 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.71
CCNK-203ENST00000553865 SPATA24Q86W54 205 aa10.65□□□□□ -0.71
CCNK-203ENST00000553865 A2ML1A8K2U0 1454 aa10.65□□□□□ -0.71
CCNK-203ENST00000553865 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 CCDC69A6NI79 296 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 MAP2K1Q02750 393 aaPredicted RBP10.64□□□□□ -0.71
CCNK-203ENST00000553865 NUCB1Q02818 461 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 FLIIQ13045 1269 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 HYPKQ9NX55 129 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
CCNK-203ENST00000553865 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
CCNK-203ENST00000553865 DBF4Q9UBU7 674 aaPredicted RBP10.64□□□□□ -0.71
CCNK-203ENST00000553865 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 DEPDC5O75140 1603 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 ABCA6Q8N139 1617 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 TEX13AQ9BXU3 409 aaPredicted RBP10.64□□□□□ -0.71
CCNK-203ENST00000553865 KIDINS220Q9ULH0 1771 aa10.64□□□□□ -0.71
CCNK-203ENST00000553865 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCNK-203ENST00000553865 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
CCNK-203ENST00000553865 STAMBPO95630 424 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 ARHGEF10O15013 1369 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 IMMTQ16891 758 aaKnown RBP10.63□□□□□ -0.71
CCNK-203ENST00000553865 TTC22Q5TAA0 569 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 SOGA3Q5TF21 947 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 TMCO3Q6UWJ1 677 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 MICALCLQ6ZW33 695 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 DLC1Q96QB1 1528 aa10.63□□□□□ -0.71
CCNK-203ENST00000553865 PPRC1Q5VV67 1664 aaKnown RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 F6X3S4 739 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 CEP57L1Q8IYX8 460 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 WASF1Q92558 559 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 UBXN4Q92575 508 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 REREQ9P2R6 1566 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 GPATCH11Q8N954 259 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 TNPO1Q92973 898 aaKnown RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 CRACR2AQ9BSW2 395 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 ZSCAN30Q86W11 494 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 PDCL3Q9H2J4 239 aa10.62□□□□□ -0.71
CCNK-203ENST00000553865 NPHP4O75161 1426 aaPredicted RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 HMGB1P09429 215 aaKnown RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
CCNK-203ENST00000553865 STARD3NLO95772 234 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 CCDC183Q5T5S1 534 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 SCAND2PQ9GZW5 306 aaPredicted RBP10.61□□□□□ -0.71
CCNK-203ENST00000553865 LIMCH1Q9UPQ0 1083 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 SYCE3A1L190 88 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 ZC3H6P61129 1189 aaKnown RBP10.61□□□□□ -0.71
CCNK-203ENST00000553865 VWDEQ8N2E2 1590 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 CCDC83Q8IWF9 413 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 IPO4Q8TEX9 1081 aaKnown RBP10.61□□□□□ -0.71
CCNK-203ENST00000553865 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
CCNK-203ENST00000553865 KIF2AO00139 706 aaPredicted RBP10.6□□□□□ -0.71
CCNK-203ENST00000553865 KDM4AO75164 1064 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
CCNK-203ENST00000553865 RTL1A6NKG5 1358 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 SSFA2P28290 1259 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 MYD88Q99836 296 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 POLKQ9UBT6 870 aa10.6□□□□□ -0.71
CCNK-203ENST00000553865 PCDHB15Q9Y5E8 787 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms