RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-204ENST00000553840 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
FOXN3-204ENST00000553840 C9orf131Q5VYM1 1079 aa23.21■■□□□ 1.31
FOXN3-204ENST00000553840 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
FOXN3-204ENST00000553840 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
FOXN3-204ENST00000553840 SBF1O95248 1867 aa23.2■■□□□ 1.3
FOXN3-204ENST00000553840 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
FOXN3-204ENST00000553840 KIF6Q6ZMV9 814 aa23.2■■□□□ 1.3
FOXN3-204ENST00000553840 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
FOXN3-204ENST00000553840 NGEFQ8N5V2 710 aa23.2■■□□□ 1.3
FOXN3-204ENST00000553840 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.3
FOXN3-204ENST00000553840 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
FOXN3-204ENST00000553840 NUP98P52948 1817 aa23.18■■□□□ 1.3
FOXN3-204ENST00000553840 ERVV-1B6SEH8 477 aa23.18■■□□□ 1.3
FOXN3-204ENST00000553840 MYL6BP14649 208 aa23.18■■□□□ 1.3
FOXN3-204ENST00000553840 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
FOXN3-204ENST00000553840 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
FOXN3-204ENST00000553840 CNKSR1Q969H4 720 aa23.17■■□□□ 1.3
FOXN3-204ENST00000553840 COL11A2P13942 1736 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-204ENST00000553840 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-204ENST00000553840 MAP3K15Q6ZN16 1313 aa23.15■■□□□ 1.3
FOXN3-204ENST00000553840 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
FOXN3-204ENST00000553840 HLFQ16534 295 aa23.15■■□□□ 1.3
FOXN3-204ENST00000553840 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
FOXN3-204ENST00000553840 CACNA1SQ13698 1873 aa23.15■■□□□ 1.3
FOXN3-204ENST00000553840 CCDC88AQ3V6T2 1871 aa23.14■■□□□ 1.29
FOXN3-204ENST00000553840 MASTLQ96GX5 879 aa23.14■■□□□ 1.29
FOXN3-204ENST00000553840 NYXQ9GZU5 481 aa23.14■■□□□ 1.29
FOXN3-204ENST00000553840 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.29
FOXN3-204ENST00000553840 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
FOXN3-204ENST00000553840 FAM177BA6PVY3 158 aa23.13■■□□□ 1.29
FOXN3-204ENST00000553840 SRGNP10124 158 aa23.13■■□□□ 1.29
FOXN3-204ENST00000553840 LMNB1P20700 586 aa23.13■■□□□ 1.29
FOXN3-204ENST00000553840 KDM2BQ8NHM5 1336 aa23.12■■□□□ 1.29
FOXN3-204ENST00000553840 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
FOXN3-204ENST00000553840 CHL1O00533 1208 aa23.12■■□□□ 1.29
FOXN3-204ENST00000553840 RASSF7Q02833 373 aa23.12■■□□□ 1.29
FOXN3-204ENST00000553840 TTLL7Q6ZT98 887 aa23.12■■□□□ 1.29
FOXN3-204ENST00000553840 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
FOXN3-204ENST00000553840 C21orf2O43822 256 aa23.11■■□□□ 1.29
FOXN3-204ENST00000553840 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
FOXN3-204ENST00000553840 ZBTB3Q9H5J0 574 aa23.11■■□□□ 1.29
FOXN3-204ENST00000553840 KIF3CO14782 793 aa23.1■■□□□ 1.29
FOXN3-204ENST00000553840 NPR1P16066 1061 aa23.1■■□□□ 1.29
FOXN3-204ENST00000553840 ZNF219Q9P2Y4 722 aaPredicted RBP23.1■■□□□ 1.29
FOXN3-204ENST00000553840 SLX4Q8IY92 1834 aa23.09■■□□□ 1.29
FOXN3-204ENST00000553840 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
FOXN3-204ENST00000553840 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
FOXN3-204ENST00000553840 CALD1Q05682 793 aaKnown RBP23.08■■□□□ 1.29
FOXN3-204ENST00000553840 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
FOXN3-204ENST00000553840 GIGYF2Q6Y7W6 1299 aaKnown RBP23.08■■□□□ 1.29
FOXN3-204ENST00000553840 CFAP44Q96MT7 982 aa23.08■■□□□ 1.29
FOXN3-204ENST00000553840 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
FOXN3-204ENST00000553840 APAF1O14727 1248 aa23.07■■□□□ 1.28
FOXN3-204ENST00000553840 NFKBIEO00221 500 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 TOMM70O94826 608 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 GPTP24298 496 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 ALDH1B1P30837 517 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 PDIA6Q15084 440 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 C16orf71Q8IYS4 520 aaPredicted RBP23.06■■□□□ 1.28
FOXN3-204ENST00000553840 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 NMRK2Q9NPI5 230 aa23.06■■□□□ 1.28
FOXN3-204ENST00000553840 TNRC6CQ9HCJ0 1690 aaKnown RBP23.06■■□□□ 1.28
FOXN3-204ENST00000553840 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
FOXN3-204ENST00000553840 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
FOXN3-204ENST00000553840 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
FOXN3-204ENST00000553840 HOXB7P09629 217 aa23.05■■□□□ 1.28
FOXN3-204ENST00000553840 PPP1R42Q7Z4L9 355 aa23.05■■□□□ 1.28
FOXN3-204ENST00000553840 ZNF34Q8IZ26 560 aa23.05■■□□□ 1.28
FOXN3-204ENST00000553840 TAOK3Q9H2K8 898 aa23.05■■□□□ 1.28
FOXN3-204ENST00000553840 PARP10Q53GL7 1025 aa23.04■■□□□ 1.28
FOXN3-204ENST00000553840 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
FOXN3-204ENST00000553840 ANXA1P04083 346 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 GNAI1P63096 354 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 ERFEQ4G0M1 354 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 HSP90AB3PQ58FF7 597 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 LRP10Q7Z4F1 713 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 LTBP3Q9NS15 1303 aa23.03■■□□□ 1.28
FOXN3-204ENST00000553840 ANKRD36CQ5JPF3 1778 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 ANP32CO43423 234 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
FOXN3-204ENST00000553840 KRT24Q2M2I5 525 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 CCDC93Q567U6 631 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 SUSD4Q5VX71 490 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 COPS6Q7L5N1 327 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 UBN2Q6ZU65 1347 aa23.02■■□□□ 1.28
FOXN3-204ENST00000553840 HSPA6P17066 643 aa23.01■■□□□ 1.27
FOXN3-204ENST00000553840 DPY19L2Q6NUT2 758 aa23.01■■□□□ 1.27
FOXN3-204ENST00000553840 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
FOXN3-204ENST00000553840 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
FOXN3-204ENST00000553840 RRAGCQ9HB90 399 aa23.01■■□□□ 1.27
FOXN3-204ENST00000553840 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
FOXN3-204ENST00000553840 RIC1Q4ADV7 1423 aa23■■□□□ 1.27
FOXN3-204ENST00000553840 GLTPD2A6NH11 291 aa23■■□□□ 1.27
FOXN3-204ENST00000553840 PRELPP51888 382 aa23■■□□□ 1.27
FOXN3-204ENST00000553840 MBIPQ9NS73 344 aa23■■□□□ 1.27
FOXN3-204ENST00000553840 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms