RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 IL1RAPL2Q9NP60 686 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
RAB5B-210ENST00000553116 NRAPQ86VF7 1730 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 PAPPAQ13219 1627 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 IBTKQ9P2D0 1353 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-210ENST00000553116 ZBTB3Q9H5J0 574 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 JCADQ9P266 1359 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 CDC45O75419 566 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 STARD3NLO95772 234 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
RAB5B-210ENST00000553116 NBPF14Q5TI25 921 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 NBPF10Q6P3W6 841 aaKnown RBP10.19□□□□□ -0.78
RAB5B-210ENST00000553116 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 NBPF15Q8N660 670 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 PLBD2Q8NHP8 589 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 SUCLG2Q96I99 432 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 ARFGEF2Q9Y6D5 1785 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 GLI3P10071 1580 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 GSPT1P15170 499 aaKnown RBP10.19□□□□□ -0.78
RAB5B-210ENST00000553116 GCKRQ14397 625 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 HSP90AB4PQ58FF6 505 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 TSHZ3Q63HK5 1081 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 CASC1Q6TDU7 716 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 TTLL7Q6ZT98 887 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 JARID2Q92833 1246 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-210ENST00000553116 TEX13AQ9BXU3 409 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-210ENST00000553116 C22orf23Q9BZE7 217 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 PODXL2Q9NZ53 605 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 NWD2Q9ULI1 1742 aa10.19□□□□□ -0.78
RAB5B-210ENST00000553116 RAB11FIP3O75154 756 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 MEX3CQ5U5Q3 659 aaKnown RBP10.18□□□□□ -0.78
RAB5B-210ENST00000553116 UBE3BQ7Z3V4 1068 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
RAB5B-210ENST00000553116 SPATA31A5Q5VU36 1347 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 SPATA31A7Q8IWB4 1347 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 MX1P20591 662 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 A0A087WZG4 1122 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 PDE1AP54750 535 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 POLA2Q14181 598 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
RAB5B-210ENST00000553116 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-210ENST00000553116 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 LRP10Q7Z4F1 713 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 UNC5CLQ8IV45 518 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 KIF1BPQ96EK5 621 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 TBC1D32Q96NH3 1257 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
RAB5B-210ENST00000553116 BCL9O00512 1426 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 BECN1Q14457 450 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 RHPN1Q8TCX5 695 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
RAB5B-210ENST00000553116 SLIT2O94813 1529 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 SIL1Q9H173 461 aa10.17□□□□□ -0.78
RAB5B-210ENST00000553116 SDSP20132 328 aa10.16□□□□□ -0.78
RAB5B-210ENST00000553116 G3BP1Q13283 466 aaKnown RBP eCLIP10.16□□□□□ -0.78
RAB5B-210ENST00000553116 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
RAB5B-210ENST00000553116 RILPL2Q969X0 211 aa10.16□□□□□ -0.78
RAB5B-210ENST00000553116 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
RAB5B-210ENST00000553116 CWC25Q9NXE8 425 aaPredicted RBP10.16□□□□□ -0.78
RAB5B-210ENST00000553116 LRP6O75581 1613 aa10.15□□□□□ -0.78
RAB5B-210ENST00000553116 MTX1Q13505 466 aa10.15□□□□□ -0.78
RAB5B-210ENST00000553116 CLASRPQ8N2M8 674 aaKnown RBP10.15□□□□□ -0.78
RAB5B-210ENST00000553116 ERC1Q8IUD2 1116 aa10.15□□□□□ -0.78
RAB5B-210ENST00000553116 MARCH10Q8NA82 808 aaPredicted RBP10.15□□□□□ -0.78
RAB5B-210ENST00000553116 UTYO14607 1347 aa10.15□□□□□ -0.79
RAB5B-210ENST00000553116 BARGINQ6ZT62 677 aa10.15□□□□□ -0.79
RAB5B-210ENST00000553116 USP21Q9UK80 565 aa10.15□□□□□ -0.79
RAB5B-210ENST00000553116 IFIT2P09913 472 aaKnown RBP10.14□□□□□ -0.79
RAB5B-210ENST00000553116 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
RAB5B-210ENST00000553116 KLHDC4Q8TBB5 520 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 GPATCH3Q96I76 525 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 SPATA31A6Q5VVP1 1343 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 EPHA10Q5JZY3 1008 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 NUP188Q5SRE5 1749 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 VPS72Q15906 364 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 AACSQ86V21 672 aa10.13□□□□□ -0.79
RAB5B-210ENST00000553116 MAP4K4O95819 1239 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-210ENST00000553116 CCDC191Q8NCU4 936 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 CYP19A1P11511 503 aaPredicted RBP10.12□□□□□ -0.79
RAB5B-210ENST00000553116 SLC4A9Q96Q91 983 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 GPTP24298 496 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 HSPA1LP34931 641 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 LMBR1LQ6UX01 489 aa10.12□□□□□ -0.79
RAB5B-210ENST00000553116 BCL9LQ86UU0 1499 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 SALL3Q9BXA9 1300 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms