RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 TXNRD1Q16881 649 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
AC055716.2-201ENST00000552545 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
AC055716.2-201ENST00000552545 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
AC055716.2-201ENST00000552545 MYD88Q99836 296 aa11.02□□□□□ -0.65
AC055716.2-201ENST00000552545 GNPATO15228 680 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 IL6STP40189 918 aaPredicted RBP11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 NEXNQ0ZGT2 675 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 PLBD2Q8NHP8 589 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 SRCIN1Q9C0H9 1055 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 PHF14O94880 888 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 CCDC136Q96JN2 1154 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 AK7Q96M32 723 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
AC055716.2-201ENST00000552545 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
AC055716.2-201ENST00000552545 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
AC055716.2-201ENST00000552545 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
AC055716.2-201ENST00000552545 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
AC055716.2-201ENST00000552545 C1orf115Q9H7X2 142 aa11□□□□□ -0.65
AC055716.2-201ENST00000552545 AFDNP55196 1824 aaKnown RBP11□□□□□ -0.65
AC055716.2-201ENST00000552545 PLSCR1O15162 318 aa11□□□□□ -0.65
AC055716.2-201ENST00000552545 PROM2Q8N271 834 aa11□□□□□ -0.65
AC055716.2-201ENST00000552545 ZBTB7BO15156 539 aaPredicted RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 C4BP0C0L5 1744 aa10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 CICQ96RK0 1608 aaPredicted RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 METTL22Q9BUU2 404 aaPredicted RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 MEIS3Q99687 375 aa10.99□□□□□ -0.65
AC055716.2-201ENST00000552545 COL15A1P39059 1388 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 RPS6KA4O75676 772 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 EZH2Q15910 746 aaKnown RBP10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 HLFQ16534 295 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 C9orf78Q9NZ63 289 aaPredicted RBP10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 NUP98P52948 1817 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
AC055716.2-201ENST00000552545 RREB1Q92766 1687 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 A0A087WZG4 1122 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 GPTP24298 496 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 BAG6P46379 1132 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 JARID2Q92833 1246 aaPredicted RBP10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 ZBTB40Q9NUA8 1239 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 MSH5O43196 834 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 IGKV5-2P06315 115 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 RTL5Q5HYW3 569 aaPredicted RBP10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 TRAPPC3LQ5T215 181 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 TFCP2L1Q9NZI6 479 aa10.97□□□□□ -0.65
AC055716.2-201ENST00000552545 N4BP2Q86UW6 1770 aaPredicted RBP10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 NEURL1BA8MQ27 555 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 ZPR1O75312 459 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 ALDH1L1O75891 902 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 UBTFL1P0CB47 393 aaPredicted RBP10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 RFC4P35249 363 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 AMIGO3Q86WK7 504 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 USP44Q9H0E7 712 aa10.96□□□□□ -0.65
AC055716.2-201ENST00000552545 FAM177BA6PVY3 158 aa10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 GNAI3P08754 354 aa10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 NBPF7P0C2Y1 421 aaPredicted RBP10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 TCIRG1Q13488 830 aa10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 ATP10DQ9P241 1426 aa10.96□□□□□ -0.66
AC055716.2-201ENST00000552545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 GCKRQ14397 625 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 HMGB2P26583 209 aaKnown RBP10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 AAMPQ13685 434 aa10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 CWC25Q9NXE8 425 aaPredicted RBP10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 LRRFIP2Q9Y608 721 aaKnown RBP10.95□□□□□ -0.66
AC055716.2-201ENST00000552545 GRM8O00222 908 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 CAMTA2O94983 1202 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 GNAI2P04899 355 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 HSP90AB3PQ58FF7 597 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 ZNF652Q9Y2D9 606 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 UBR3Q6ZT12 1888 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 UBE3BQ7Z3V4 1068 aa10.94□□□□□ -0.66
AC055716.2-201ENST00000552545 ANKRD36CQ5JPF3 1778 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms