RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 ISY1Q9ULR0 285 aaKnown RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 ZNF652Q9Y2D9 606 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 NCOA3Q9Y6Q9 1424 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 SNAP23O00161 211 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 IRS4O14654 1257 aaPredicted RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 ZBTB7AO95365 584 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 TRMT2AQ8IZ69 625 aaKnown RBP10.06□□□□□ -0.8
CHPT1-208ENST00000552215 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
CHPT1-208ENST00000552215 POLR1AO95602 1720 aaPredicted RBP10.05□□□□□ -0.8
CHPT1-208ENST00000552215 SUCLG2Q96I99 432 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 TOMM22Q9NS69 142 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 PTPRCP08575 1304 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 ZBTB7BO15156 539 aaPredicted RBP10.05□□□□□ -0.8
CHPT1-208ENST00000552215 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 ANKIB1Q9P2G1 1089 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
CHPT1-208ENST00000552215 TAF5LO75529 589 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 FGD1P98174 961 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
CHPT1-208ENST00000552215 PDE4AP27815 886 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 LRRCC1Q9C099 1032 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 CEP126Q9P2H0 1117 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 ABCF2Q9UG63 623 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 XRN1Q8IZH2 1706 aaKnown RBP10.04□□□□□ -0.8
CHPT1-208ENST00000552215 APPP05067 770 aa10.04□□□□□ -0.8
CHPT1-208ENST00000552215 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
CHPT1-208ENST00000552215 TIMM10P62072 90 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 TXNRD1Q16881 649 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 WASHC4Q2M389 1173 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 CHD1LQ86WJ1 897 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 THRAP3Q9Y2W1 955 aaKnown RBP10.03□□□□□ -0.8
CHPT1-208ENST00000552215 KDRP35968 1356 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 C6orf229H3BNL8 230 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 BAG6P46379 1132 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CHPT1-208ENST00000552215 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
CHPT1-208ENST00000552215 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 ZBTB40Q9NUA8 1239 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 USP32Q8NFA0 1604 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 CPDO75976 1380 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 HSP90AB3PQ58FF7 597 aa10.03□□□□□ -0.8
CHPT1-208ENST00000552215 HEG1Q9ULI3 1381 aa10.02□□□□□ -0.8
CHPT1-208ENST00000552215 GCKRQ14397 625 aa10.02□□□□□ -0.8
CHPT1-208ENST00000552215 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.8
CHPT1-208ENST00000552215 UTP14AQ9BVJ6 771 aaKnown RBP10.02□□□□□ -0.8
CHPT1-208ENST00000552215 ANO2Q9NQ90 1003 aa10.02□□□□□ -0.8
CHPT1-208ENST00000552215 STK32BQ9NY57 414 aa10.02□□□□□ -0.8
CHPT1-208ENST00000552215 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
CHPT1-208ENST00000552215 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 NSFL1CQ9UNZ2 370 aaKnown RBP10.02□□□□□ -0.81
CHPT1-208ENST00000552215 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 KDM4AO75164 1064 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 CEP85Q6P2H3 762 aa10.02□□□□□ -0.81
CHPT1-208ENST00000552215 IGHMBP2P38935 993 aaKnown RBP10.01□□□□□ -0.81
CHPT1-208ENST00000552215 NBR1Q14596 966 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 SLC4A9Q96Q91 983 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 MTMR7Q9Y216 660 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 CYP19A1P11511 503 aaPredicted RBP10.01□□□□□ -0.81
CHPT1-208ENST00000552215 FSD1Q9BTV5 496 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 SEC31BQ9NQW1 1179 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
CHPT1-208ENST00000552215 ROBO1Q9Y6N7 1651 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 FMN2Q9NZ56 1722 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 BEND3Q5T5X7 828 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 ERICH6BQ5W0A0 696 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 RPAP2Q8IXW5 612 aaPredicted RBP10.01□□□□□ -0.81
CHPT1-208ENST00000552215 NLRP3Q96P20 1036 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 PUS3Q9BZE2 481 aaKnown RBP10.01□□□□□ -0.81
CHPT1-208ENST00000552215 DIAPH3Q9NSV4 1193 aa10.01□□□□□ -0.81
CHPT1-208ENST00000552215 IQSEC2Q5JU85 1478 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 ANKRD18BA2A2Z9 1011 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 F8W031 263 aaPredicted RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 CNBD1Q8NA66 436 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 PIK3C2AO00443 1686 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 RAD21O60216 631 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 TCIRG1Q13488 830 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 R3HDM1Q15032 1099 aaKnown RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 ZNF142P52746 1687 aaPredicted RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 COL3A1P02461 1466 aaPredicted RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 IGKV5-2P06315 115 aa10□□□□□ -0.81
CHPT1-208ENST00000552215 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
CHPT1-208ENST00000552215 STRCP1A6NGW2 1772 aa9.99□□□□□ -0.81
CHPT1-208ENST00000552215 TFCP2Q12800 502 aa9.99□□□□□ -0.81
CHPT1-208ENST00000552215 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
CHPT1-208ENST00000552215 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms