RNA–Protein interactions for RNA: ENST00000551899.5

CCT2-213, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 4

Gene CCT2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-213ENST00000551899 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
CCT2-213ENST00000551899 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
CCT2-213ENST00000551899 LMNB1P20700 586 aa16.99■□□□□ 0.31
CCT2-213ENST00000551899 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
CCT2-213ENST00000551899 CNKSR1Q969H4 720 aa16.99■□□□□ 0.31
CCT2-213ENST00000551899 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCT2-213ENST00000551899 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
CCT2-213ENST00000551899 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
CCT2-213ENST00000551899 ARFGEF2Q9Y6D5 1785 aa16.99■□□□□ 0.31
CCT2-213ENST00000551899 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 TOMM70O94826 608 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 HSPA6P17066 643 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
CCT2-213ENST00000551899 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
CCT2-213ENST00000551899 SOGA3Q5TF21 947 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 STYK1Q6J9G0 422 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
CCT2-213ENST00000551899 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
CCT2-213ENST00000551899 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
CCT2-213ENST00000551899 TPTE2Q6XPS3 522 aa16.97■□□□□ 0.31
CCT2-213ENST00000551899 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
CCT2-213ENST00000551899 MASTLQ96GX5 879 aa16.97■□□□□ 0.31
CCT2-213ENST00000551899 NIP7Q9Y221 180 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCT2-213ENST00000551899 ERVV-1B6SEH8 477 aa16.96■□□□□ 0.31
CCT2-213ENST00000551899 RIPK4P57078 832 aa16.96■□□□□ 0.31
CCT2-213ENST00000551899 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCT2-213ENST00000551899 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
CCT2-213ENST00000551899 FER1L6Q2WGJ9 1857 aa16.96■□□□□ 0.31
CCT2-213ENST00000551899 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.3
CCT2-213ENST00000551899 CACNA1SQ13698 1873 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 SRGNP10124 158 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
CCT2-213ENST00000551899 RASSF7Q02833 373 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
CCT2-213ENST00000551899 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 NUP98P52948 1817 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
CCT2-213ENST00000551899 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
CCT2-213ENST00000551899 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
CCT2-213ENST00000551899 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
CCT2-213ENST00000551899 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
CCT2-213ENST00000551899 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
CCT2-213ENST00000551899 SLX4Q8IY92 1834 aa16.93■□□□□ 0.3
CCT2-213ENST00000551899 NFKBIEO00221 500 aa16.92■□□□□ 0.3
CCT2-213ENST00000551899 C21orf2O43822 256 aa16.92■□□□□ 0.3
CCT2-213ENST00000551899 NPR1P16066 1061 aa16.92■□□□□ 0.3
CCT2-213ENST00000551899 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
CCT2-213ENST00000551899 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
CCT2-213ENST00000551899 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
CCT2-213ENST00000551899 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
CCT2-213ENST00000551899 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
CCT2-213ENST00000551899 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
CCT2-213ENST00000551899 APLP1P51693 650 aa16.91■□□□□ 0.3
CCT2-213ENST00000551899 FSTL1Q12841 308 aa16.91■□□□□ 0.3
CCT2-213ENST00000551899 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
CCT2-213ENST00000551899 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
CCT2-213ENST00000551899 HLFQ16534 295 aa16.9■□□□□ 0.3
CCT2-213ENST00000551899 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
CCT2-213ENST00000551899 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
CCT2-213ENST00000551899 MYL6BP14649 208 aa16.89■□□□□ 0.29
CCT2-213ENST00000551899 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
CCT2-213ENST00000551899 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
CCT2-213ENST00000551899 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
CCT2-213ENST00000551899 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
CCT2-213ENST00000551899 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
CCT2-213ENST00000551899 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
CCT2-213ENST00000551899 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
CCT2-213ENST00000551899 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
CCT2-213ENST00000551899 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
CCT2-213ENST00000551899 PRELPP51888 382 aa16.87■□□□□ 0.29
CCT2-213ENST00000551899 GIGYF2Q6Y7W6 1299 aaKnown RBP16.87■□□□□ 0.29
CCT2-213ENST00000551899 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
CCT2-213ENST00000551899 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
CCT2-213ENST00000551899 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
CCT2-213ENST00000551899 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 SMC1BQ8NDV3 1235 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 ZBTB3Q9H5J0 574 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 WDR90Q96KV7 1748 aa16.86■□□□□ 0.29
CCT2-213ENST00000551899 CHL1O00533 1208 aa16.85■□□□□ 0.29
CCT2-213ENST00000551899 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
CCT2-213ENST00000551899 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
CCT2-213ENST00000551899 C7orf43Q8WVR3 580 aa16.85■□□□□ 0.29
CCT2-213ENST00000551899 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
CCT2-213ENST00000551899 HOXB7P09629 217 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
CCT2-213ENST00000551899 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCT2-213ENST00000551899 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 CC2D2BQ6DHV5 1058 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 CEP350Q5VT06 3117 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
CCT2-213ENST00000551899 GPTP24298 496 aa16.83■□□□□ 0.28
CCT2-213ENST00000551899 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms