RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 CLASRPQ8N2M8 674 aaKnown RBP28.36■■■□□ 2.13
NPAS3-211ENST00000551634 UQCRHLA0A096LP55 91 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 DYNC1I1O14576 645 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 UQCRHP07919 91 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 IP6K1Q92551 441 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 SH2B1Q9NRF2 756 aaPredicted RBP28.35■■■□□ 2.13
NPAS3-211ENST00000551634 HYPKQ9NX55 129 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 HDAC5Q9UQL6 1122 aa28.35■■■□□ 2.13
NPAS3-211ENST00000551634 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.35■■■□□ 2.13
NPAS3-211ENST00000551634 CASTP20810 708 aaKnown RBP28.34■■■□□ 2.13
NPAS3-211ENST00000551634 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
NPAS3-211ENST00000551634 OS9Q13438 667 aaPredicted RBP28.34■■■□□ 2.13
NPAS3-211ENST00000551634 ERC1Q8IUD2 1116 aa28.34■■■□□ 2.13
NPAS3-211ENST00000551634 USHBP1Q8N6Y0 703 aa28.34■■■□□ 2.13
NPAS3-211ENST00000551634 GPATCH3Q96I76 525 aa28.34■■■□□ 2.13
NPAS3-211ENST00000551634 ADCY9O60503 1353 aa28.33■■■□□ 2.13
NPAS3-211ENST00000551634 THEMISQ8N1K5 641 aaPredicted RBP28.33■■■□□ 2.13
NPAS3-211ENST00000551634 ECHDC1Q9NTX5 307 aa28.33■■■□□ 2.13
NPAS3-211ENST00000551634 ALDH1L1O75891 902 aa28.33■■■□□ 2.13
NPAS3-211ENST00000551634 PDIA4P13667 645 aaKnown RBP28.32■■■□□ 2.12
NPAS3-211ENST00000551634 LTN1O94822 1766 aa28.32■■■□□ 2.12
NPAS3-211ENST00000551634 LGR6Q9HBX8 967 aa28.32■■■□□ 2.12
NPAS3-211ENST00000551634 ZSWIM6Q9HCJ5 1215 aa28.32■■■□□ 2.12
NPAS3-211ENST00000551634 ADGRL3Q9HAR2 1447 aa28.31■■■□□ 2.12
NPAS3-211ENST00000551634 MTERF4Q7Z6M4 381 aaKnown RBP28.31■■■□□ 2.12
NPAS3-211ENST00000551634 PDRG1Q9NUG6 133 aa28.31■■■□□ 2.12
NPAS3-211ENST00000551634 DBF4Q9UBU7 674 aaPredicted RBP28.3■■■□□ 2.12
NPAS3-211ENST00000551634 VSIG10Q8N0Z9 540 aa28.3■■■□□ 2.12
NPAS3-211ENST00000551634 CYP46A1Q9Y6A2 500 aa28.3■■■□□ 2.12
NPAS3-211ENST00000551634 TEFQ10587 303 aa28.29■■■□□ 2.12
NPAS3-211ENST00000551634 LMO7Q8WWI1 1683 aa28.29■■■□□ 2.12
NPAS3-211ENST00000551634 AKAP4Q5JQC9 854 aa28.29■■■□□ 2.12
NPAS3-211ENST00000551634 EVI5LQ96CN4 794 aa28.29■■■□□ 2.12
NPAS3-211ENST00000551634 USP25Q9UHP3 1055 aa28.29■■■□□ 2.12
NPAS3-211ENST00000551634 GJB2P29033 226 aa28.28■■■□□ 2.12
NPAS3-211ENST00000551634 NBPF6Q5VWK0 638 aa28.28■■■□□ 2.12
NPAS3-211ENST00000551634 NBPF4Q96M43 638 aa28.28■■■□□ 2.12
NPAS3-211ENST00000551634 MTMR6Q9Y217 621 aa28.28■■■□□ 2.12
NPAS3-211ENST00000551634 PTH1RQ03431 593 aa28.28■■■□□ 2.12
NPAS3-211ENST00000551634 JAKMIP1Q96N16 626 aaKnown RBP28.28■■■□□ 2.12
NPAS3-211ENST00000551634 LARGE1O95461 756 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 PIBF1Q8WXW3 757 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 BTBD11A6QL63 1104 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 ADCY5O95622 1261 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 FUCA2Q9BTY2 467 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 HIP1O00291 1037 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 FIBPO43427 364 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 IFIT2P09913 472 aaKnown RBP28.27■■■□□ 2.12
NPAS3-211ENST00000551634 HCLS1P14317 486 aaPredicted RBP28.27■■■□□ 2.12
NPAS3-211ENST00000551634 KCNA6P17658 529 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 RBM10P98175 930 aaKnown RBP28.27■■■□□ 2.12
NPAS3-211ENST00000551634 NECTIN1Q15223 517 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 CCDC83Q8IWF9 413 aa28.27■■■□□ 2.12
NPAS3-211ENST00000551634 NFAT5O94916 1531 aa28.26■■■□□ 2.12
NPAS3-211ENST00000551634 ZKSCAN1P17029 563 aaPredicted RBP28.26■■■□□ 2.11
NPAS3-211ENST00000551634 PRPF40BQ6NWY9 871 aaKnown RBP28.26■■■□□ 2.11
NPAS3-211ENST00000551634 LARP6Q9BRS8 491 aaKnown RBP28.26■■■□□ 2.11
NPAS3-211ENST00000551634 KCNQ3O43525 872 aa28.26■■■□□ 2.11
NPAS3-211ENST00000551634 FAM13BQ9NYF5 915 aa28.26■■■□□ 2.11
NPAS3-211ENST00000551634 C9orf78Q9NZ63 289 aaPredicted RBP28.26■■■□□ 2.11
NPAS3-211ENST00000551634 KDM4AO75164 1064 aa28.25■■■□□ 2.11
NPAS3-211ENST00000551634 CPA1P15085 419 aa28.25■■■□□ 2.11
NPAS3-211ENST00000551634 CCDC171Q6TFL3 1326 aa28.25■■■□□ 2.11
NPAS3-211ENST00000551634 ADCK5Q3MIX3 580 aa28.25■■■□□ 2.11
NPAS3-211ENST00000551634 CHD2O14647 1828 aaKnown RBP28.25■■■□□ 2.11
NPAS3-211ENST00000551634 PLEKHO1Q53GL0 409 aaPredicted RBP28.24■■■□□ 2.11
NPAS3-211ENST00000551634 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
NPAS3-211ENST00000551634 NCAPD2Q15021 1401 aa28.24■■■□□ 2.11
NPAS3-211ENST00000551634 KSR2Q6VAB6 950 aa28.24■■■□□ 2.11
NPAS3-211ENST00000551634 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
NPAS3-211ENST00000551634 OVOS2A0A0G2JMS6 1433 aa28.23■■■□□ 2.11
NPAS3-211ENST00000551634 AMOTQ4VCS5 1084 aa28.23■■■□□ 2.11
NPAS3-211ENST00000551634 ZNF530Q6P9A1 599 aaPredicted RBP28.23■■■□□ 2.11
NPAS3-211ENST00000551634 SNRKQ9NRH2 765 aa28.23■■■□□ 2.11
NPAS3-211ENST00000551634 ANXA1P04083 346 aa28.22■■■□□ 2.11
NPAS3-211ENST00000551634 DNM1Q05193 864 aaKnown RBP28.22■■■□□ 2.11
NPAS3-211ENST00000551634 MAP3K2Q9Y2U5 619 aa28.22■■■□□ 2.11
NPAS3-211ENST00000551634 PHRF1Q9P1Y6 1649 aaKnown RBP28.22■■■□□ 2.11
NPAS3-211ENST00000551634 KCNH5Q8NCM2 988 aa28.22■■■□□ 2.11
NPAS3-211ENST00000551634 PRIMPOLQ96LW4 560 aa28.21■■■□□ 2.11
NPAS3-211ENST00000551634 NOLC1Q14978 699 aaKnown RBP eCLIP28.21■■■□□ 2.11
NPAS3-211ENST00000551634 MAP4K1Q92918 833 aa28.21■■■□□ 2.11
NPAS3-211ENST00000551634 PSMA5P28066 241 aa28.2■■■□□ 2.11
NPAS3-211ENST00000551634 HEG1Q9ULI3 1381 aa28.2■■■□□ 2.11
NPAS3-211ENST00000551634 ME3Q16798 604 aa28.2■■■□□ 2.1
NPAS3-211ENST00000551634 CREB3L3Q68CJ9 461 aa28.2■■■□□ 2.1
NPAS3-211ENST00000551634 MYRIPQ8NFW9 859 aa28.2■■■□□ 2.1
NPAS3-211ENST00000551634 RBM8AQ9Y5S9 174 aaKnown RBP28.2■■■□□ 2.1
NPAS3-211ENST00000551634 HMGN5P82970 282 aaKnown RBP28.19■■■□□ 2.1
NPAS3-211ENST00000551634 ST3GAL1Q11201 340 aa28.19■■■□□ 2.1
NPAS3-211ENST00000551634 AACSQ86V21 672 aa28.19■■■□□ 2.1
NPAS3-211ENST00000551634 RNMTO43148 476 aaKnown RBP28.19■■■□□ 2.1
NPAS3-211ENST00000551634 GIGYF1O75420 1035 aaPredicted RBP28.19■■■□□ 2.1
NPAS3-211ENST00000551634 UTYO14607 1347 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 TPM3P06753 285 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 GIMAP6Q6P9H5 292 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 SPTLC3Q9NUV7 552 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 PDCP20941 246 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 LINS1Q8NG48 757 aa28.18■■■□□ 2.1
NPAS3-211ENST00000551634 PA2G4Q9UQ80 394 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms