RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TIAM2Q8IVF5 1701 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
NPAS3-209ENST00000551008 PRELPP51888 382 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 CLEC4GQ6UXB4 293 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 TTLL7Q6ZT98 887 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
NPAS3-209ENST00000551008 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
NPAS3-209ENST00000551008 RGL2O15211 777 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
NPAS3-209ENST00000551008 PDIA6Q15084 440 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
NPAS3-209ENST00000551008 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
NPAS3-209ENST00000551008 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
NPAS3-209ENST00000551008 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
NPAS3-209ENST00000551008 CHL1O00533 1208 aa17.13■□□□□ 0.33
NPAS3-209ENST00000551008 RASSF7Q02833 373 aa17.13■□□□□ 0.33
NPAS3-209ENST00000551008 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
NPAS3-209ENST00000551008 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
NPAS3-209ENST00000551008 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
NPAS3-209ENST00000551008 C9orf131Q5VYM1 1079 aa17.12■□□□□ 0.33
NPAS3-209ENST00000551008 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
NPAS3-209ENST00000551008 MAP3K15Q6ZN16 1313 aa17.12■□□□□ 0.33
NPAS3-209ENST00000551008 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
NPAS3-209ENST00000551008 H0YIN7 160 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 NFKBIEO00221 500 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 ANXA1P04083 346 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 MYL6BP14649 208 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
NPAS3-209ENST00000551008 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 NIP7Q9Y221 180 aaKnown RBP eCLIP17.11■□□□□ 0.33
NPAS3-209ENST00000551008 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
NPAS3-209ENST00000551008 LAMB2P55268 1798 aa17.1■□□□□ 0.33
NPAS3-209ENST00000551008 KIF3CO14782 793 aa17.1■□□□□ 0.33
NPAS3-209ENST00000551008 SRGNP10124 158 aa17.1■□□□□ 0.33
NPAS3-209ENST00000551008 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
NPAS3-209ENST00000551008 ZNF652Q9Y2D9 606 aa17.1■□□□□ 0.33
NPAS3-209ENST00000551008 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
NPAS3-209ENST00000551008 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
NPAS3-209ENST00000551008 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
NPAS3-209ENST00000551008 APAF1O14727 1248 aa17.09■□□□□ 0.33
NPAS3-209ENST00000551008 PDE6BP35913 854 aa17.09■□□□□ 0.33
NPAS3-209ENST00000551008 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
NPAS3-209ENST00000551008 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
NPAS3-209ENST00000551008 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
NPAS3-209ENST00000551008 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
NPAS3-209ENST00000551008 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
NPAS3-209ENST00000551008 ST5P78524 1137 aa17.07■□□□□ 0.32
NPAS3-209ENST00000551008 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
NPAS3-209ENST00000551008 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
NPAS3-209ENST00000551008 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
NPAS3-209ENST00000551008 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
NPAS3-209ENST00000551008 RIC1Q4ADV7 1423 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 SNED1Q8TER0 1413 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
NPAS3-209ENST00000551008 GPTP24298 496 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 NMRK2Q9NPI5 230 aa17.06■□□□□ 0.32
NPAS3-209ENST00000551008 C21orf2O43822 256 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
NPAS3-209ENST00000551008 GIGYF2Q6Y7W6 1299 aaKnown RBP17.05■□□□□ 0.32
NPAS3-209ENST00000551008 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 LAS1LQ9Y4W2 734 aaKnown RBP17.05■□□□□ 0.32
NPAS3-209ENST00000551008 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
NPAS3-209ENST00000551008 NTSR2O95665 410 aa17.04■□□□□ 0.32
NPAS3-209ENST00000551008 SUSD4Q5VX71 490 aa17.04■□□□□ 0.32
NPAS3-209ENST00000551008 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
NPAS3-209ENST00000551008 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
NPAS3-209ENST00000551008 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
NPAS3-209ENST00000551008 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
NPAS3-209ENST00000551008 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
NPAS3-209ENST00000551008 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
NPAS3-209ENST00000551008 SLC51AQ86UW1 340 aa17.03■□□□□ 0.32
NPAS3-209ENST00000551008 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
NPAS3-209ENST00000551008 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
NPAS3-209ENST00000551008 TAF1P21675 1872 aa17.03■□□□□ 0.32
NPAS3-209ENST00000551008 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 NPHP1O15259 732 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 LMNB1P20700 586 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
NPAS3-209ENST00000551008 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 HOXB7P09629 217 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 NPR1P16066 1061 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 KCNA4P22459 653 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
NPAS3-209ENST00000551008 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
NPAS3-209ENST00000551008 IFT57Q9NWB7 429 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 383.7 ms