RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 RNF181Q9P0P0 153 aa12.07□□□□□ -0.48
LETMD1-228ENST00000550929 RASSF7Q02833 373 aa12.06□□□□□ -0.48
LETMD1-228ENST00000550929 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
LETMD1-228ENST00000550929 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
LETMD1-228ENST00000550929 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
LETMD1-228ENST00000550929 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
LETMD1-228ENST00000550929 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
LETMD1-228ENST00000550929 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
LETMD1-228ENST00000550929 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
LETMD1-228ENST00000550929 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
LETMD1-228ENST00000550929 HSPA6P17066 643 aa12.05□□□□□ -0.48
LETMD1-228ENST00000550929 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-228ENST00000550929 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.48
LETMD1-228ENST00000550929 H0YIN7 160 aa12.04□□□□□ -0.48
LETMD1-228ENST00000550929 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
LETMD1-228ENST00000550929 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
LETMD1-228ENST00000550929 TTLL6Q8N841 843 aa12.04□□□□□ -0.48
LETMD1-228ENST00000550929 UBR2Q8IWV8 1755 aa12.04□□□□□ -0.48
LETMD1-228ENST00000550929 NPHP1O15259 732 aa12.03□□□□□ -0.48
LETMD1-228ENST00000550929 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
LETMD1-228ENST00000550929 PRR5LQ6MZQ0 368 aa12.03□□□□□ -0.48
LETMD1-228ENST00000550929 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
LETMD1-228ENST00000550929 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
LETMD1-228ENST00000550929 PRELPP51888 382 aa12.02□□□□□ -0.49
LETMD1-228ENST00000550929 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.49
LETMD1-228ENST00000550929 BRCA1P38398 1863 aaKnown RBP12.01□□□□□ -0.49
LETMD1-228ENST00000550929 AFDNP55196 1824 aaKnown RBP12.01□□□□□ -0.49
LETMD1-228ENST00000550929 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-228ENST00000550929 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
LETMD1-228ENST00000550929 C21orf2O43822 256 aa12.01□□□□□ -0.49
LETMD1-228ENST00000550929 TOMM70O94826 608 aa12.01□□□□□ -0.49
LETMD1-228ENST00000550929 NEFMP07197 916 aa12.01□□□□□ -0.49
LETMD1-228ENST00000550929 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-228ENST00000550929 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-228ENST00000550929 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
LETMD1-228ENST00000550929 NBPF26B4DH59 902 aa12□□□□□ -0.49
LETMD1-228ENST00000550929 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
LETMD1-228ENST00000550929 NBPF10Q6P3W6 841 aaKnown RBP12□□□□□ -0.49
LETMD1-228ENST00000550929 NBPF15Q8N660 670 aa12□□□□□ -0.49
LETMD1-228ENST00000550929 CNBD1Q8NA66 436 aa12□□□□□ -0.49
LETMD1-228ENST00000550929 BRIP1Q9BX63 1249 aa12□□□□□ -0.49
LETMD1-228ENST00000550929 NRXN2Q9P2S2 1712 aa11.99□□□□□ -0.49
LETMD1-228ENST00000550929 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
LETMD1-228ENST00000550929 NFKBIEO00221 500 aa11.99□□□□□ -0.49
LETMD1-228ENST00000550929 PDE6BP35913 854 aa11.99□□□□□ -0.49
LETMD1-228ENST00000550929 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
LETMD1-228ENST00000550929 ARFGEF1Q9Y6D6 1849 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 LMNB1P20700 586 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 ST5P78524 1137 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 HTRA3P83110 453 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 HLFQ16534 295 aa11.98□□□□□ -0.49
LETMD1-228ENST00000550929 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
LETMD1-228ENST00000550929 NBPF5PQ86XG9 351 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-228ENST00000550929 NIP7Q9Y221 180 aaKnown RBP eCLIP11.97□□□□□ -0.49
LETMD1-228ENST00000550929 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
LETMD1-228ENST00000550929 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
LETMD1-228ENST00000550929 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
LETMD1-228ENST00000550929 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
LETMD1-228ENST00000550929 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
LETMD1-228ENST00000550929 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.5
LETMD1-228ENST00000550929 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 SRGNP10124 158 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 MYL6BP14649 208 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 APLP1P51693 650 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
LETMD1-228ENST00000550929 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
LETMD1-228ENST00000550929 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
LETMD1-228ENST00000550929 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 STYK1Q6J9G0 422 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 PRPF40BQ6NWY9 871 aaKnown RBP11.94□□□□□ -0.5
LETMD1-228ENST00000550929 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 MIER1Q8N108 512 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 CNKSR1Q969H4 720 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
LETMD1-228ENST00000550929 GTF2E1P29083 439 aaPredicted RBP11.93□□□□□ -0.5
LETMD1-228ENST00000550929 RIPK4P57078 832 aa11.93□□□□□ -0.5
LETMD1-228ENST00000550929 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
LETMD1-228ENST00000550929 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
LETMD1-228ENST00000550929 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
LETMD1-228ENST00000550929 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-228ENST00000550929 GPTP24298 496 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 FSTL1Q12841 308 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 CCDC146Q8IYE0 955 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 TSPYL4Q9UJ04 414 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 SBF1O95248 1867 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-228ENST00000550929 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 POTECB2RU33 542 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 NPR1P16066 1061 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
LETMD1-228ENST00000550929 RALBP1Q15311 655 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 DPY19L2Q6NUT2 758 aa11.92□□□□□ -0.5
LETMD1-228ENST00000550929 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms