RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 POTEJP0CG39 1038 aa14.9□□□□□ -0.02
PFDN5-212ENST00000550880 CTCFP49711 727 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-212ENST00000550880 EAPPQ56P03 285 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-212ENST00000550880 NBPF5PQ86XG9 351 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-212ENST00000550880 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
PFDN5-212ENST00000550880 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-212ENST00000550880 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-212ENST00000550880 CLEC11AQ9Y240 323 aa14.9□□□□□ -0.02
PFDN5-212ENST00000550880 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 BTBD11A6QL63 1104 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 FOXN1O15353 648 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
PFDN5-212ENST00000550880 CLEC4GQ6UXB4 293 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 DICER1Q9UPY3 1922 aaKnown RBP14.89□□□□□ -0.03
PFDN5-212ENST00000550880 PASKQ96RG2 1323 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 FER1L6Q2WGJ9 1857 aa14.89□□□□□ -0.03
PFDN5-212ENST00000550880 NPR1P16066 1061 aa14.88□□□□□ -0.03
PFDN5-212ENST00000550880 TPTE2Q6XPS3 522 aa14.88□□□□□ -0.03
PFDN5-212ENST00000550880 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
PFDN5-212ENST00000550880 RTKN2Q8IZC4 609 aa14.88□□□□□ -0.03
PFDN5-212ENST00000550880 HACL1Q9UJ83 578 aa14.88□□□□□ -0.03
PFDN5-212ENST00000550880 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
PFDN5-212ENST00000550880 VEGFBP49765 207 aa14.87□□□□□ -0.03
PFDN5-212ENST00000550880 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
PFDN5-212ENST00000550880 VIRMAQ69YN4 1812 aaKnown RBP14.87□□□□□ -0.03
PFDN5-212ENST00000550880 SCN7AQ01118 1682 aa14.87□□□□□ -0.03
PFDN5-212ENST00000550880 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
PFDN5-212ENST00000550880 ALDH1B1P30837 517 aa14.85□□□□□ -0.03
PFDN5-212ENST00000550880 EPHX2P34913 555 aa14.85□□□□□ -0.03
PFDN5-212ENST00000550880 C7orf43Q8WVR3 580 aa14.85□□□□□ -0.03
PFDN5-212ENST00000550880 ZNF277Q9NRM2 450 aaPredicted RBP14.85□□□□□ -0.03
PFDN5-212ENST00000550880 COL11A2P13942 1736 aaPredicted RBP14.85□□□□□ -0.03
PFDN5-212ENST00000550880 SLX4Q8IY92 1834 aa14.85□□□□□ -0.03
PFDN5-212ENST00000550880 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
PFDN5-212ENST00000550880 SNRPA1P09661 255 aaKnown RBP14.84□□□□□ -0.03
PFDN5-212ENST00000550880 DEFB115Q30KQ5 88 aa14.84□□□□□ -0.03
PFDN5-212ENST00000550880 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
PFDN5-212ENST00000550880 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
PFDN5-212ENST00000550880 USP16Q9Y5T5 823 aa14.84□□□□□ -0.03
PFDN5-212ENST00000550880 SCN4AP35499 1836 aa14.84□□□□□ -0.03
PFDN5-212ENST00000550880 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
PFDN5-212ENST00000550880 KLRG2A4D1S0 409 aaPredicted RBP14.83□□□□□ -0.04
PFDN5-212ENST00000550880 RGL2O15211 777 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 PER1O15534 1290 aaPredicted RBP14.83□□□□□ -0.04
PFDN5-212ENST00000550880 LBX1P52954 281 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 MAP2K1Q02750 393 aaPredicted RBP14.83□□□□□ -0.04
PFDN5-212ENST00000550880 CNTROBQ8N137 903 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 JDP2Q8WYK2 163 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 WBP1LQ9NX94 342 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
PFDN5-212ENST00000550880 KCNQ3O43525 872 aa14.82□□□□□ -0.04
PFDN5-212ENST00000550880 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
PFDN5-212ENST00000550880 PIP4K2AP48426 406 aaPredicted RBP14.82□□□□□ -0.04
PFDN5-212ENST00000550880 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
PFDN5-212ENST00000550880 GPC2Q8N158 579 aa14.82□□□□□ -0.04
PFDN5-212ENST00000550880 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
PFDN5-212ENST00000550880 ABT1Q9ULW3 272 aaKnown RBP14.82□□□□□ -0.04
PFDN5-212ENST00000550880 ZNF541Q9H0D2 1346 aa14.82□□□□□ -0.04
PFDN5-212ENST00000550880 RASSF10A6NK89 507 aa14.81□□□□□ -0.04
PFDN5-212ENST00000550880 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
PFDN5-212ENST00000550880 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
PFDN5-212ENST00000550880 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
PFDN5-212ENST00000550880 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
PFDN5-212ENST00000550880 CCER1Q8TC90 406 aaPredicted RBP14.81□□□□□ -0.04
PFDN5-212ENST00000550880 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
PFDN5-212ENST00000550880 RNF123Q5XPI4 1314 aa14.81□□□□□ -0.04
PFDN5-212ENST00000550880 FZD9O00144 591 aa14.8□□□□□ -0.04
PFDN5-212ENST00000550880 MAP1SQ66K74 1059 aaPredicted RBP14.8□□□□□ -0.04
PFDN5-212ENST00000550880 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
PFDN5-212ENST00000550880 BEGAINQ9BUH8 593 aa14.8□□□□□ -0.04
PFDN5-212ENST00000550880 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
PFDN5-212ENST00000550880 CACNA1SQ13698 1873 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 GRIPAP1Q4V328 841 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 PSMD1Q99460 953 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 WDR33Q9C0J8 1336 aaKnown RBP14.79□□□□□ -0.04
PFDN5-212ENST00000550880 NYXQ9GZU5 481 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 NPC1L1Q9UHC9 1359 aa14.79□□□□□ -0.04
PFDN5-212ENST00000550880 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
PFDN5-212ENST00000550880 PRAMEF22A3QJZ6 481 aa14.78□□□□□ -0.04
PFDN5-212ENST00000550880 ECE1P42892 770 aa14.78□□□□□ -0.04
PFDN5-212ENST00000550880 OLFM4Q6UX06 510 aa14.78□□□□□ -0.04
PFDN5-212ENST00000550880 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
PFDN5-212ENST00000550880 GJA3Q9Y6H8 435 aa14.78□□□□□ -0.04
PFDN5-212ENST00000550880 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
PFDN5-212ENST00000550880 BCORQ6W2J9 1755 aa14.78□□□□□ -0.04
PFDN5-212ENST00000550880 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
PFDN5-212ENST00000550880 RPGRQ92834 1020 aaKnown RBP14.77□□□□□ -0.05
PFDN5-212ENST00000550880 ABHD8Q96I13 439 aa14.77□□□□□ -0.05
PFDN5-212ENST00000550880 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.05
PFDN5-212ENST00000550880 TMX4Q9H1E5 349 aaPredicted RBP14.77□□□□□ -0.05
PFDN5-212ENST00000550880 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.05
PFDN5-212ENST00000550880 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
PFDN5-212ENST00000550880 MCM10Q7L590 875 aa14.76□□□□□ -0.05
PFDN5-212ENST00000550880 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
PFDN5-212ENST00000550880 U2AF1L5P0DN76 240 aaPredicted RBP14.75□□□□□ -0.05
PFDN5-212ENST00000550880 U2AF1Q01081 240 aaKnown RBP eCLIP14.75□□□□□ -0.05
PFDN5-212ENST00000550880 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
PFDN5-212ENST00000550880 LARGE2Q8N3Y3 721 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms