RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-214ENST00000549613 CEP85Q6P2H3 762 aa17.12■□□□□ 0.33
CALCOCO1-214ENST00000549613 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
CALCOCO1-214ENST00000549613 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
CALCOCO1-214ENST00000549613 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
CALCOCO1-214ENST00000549613 MYD88Q99836 296 aa17.11■□□□□ 0.33
CALCOCO1-214ENST00000549613 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
CALCOCO1-214ENST00000549613 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
CALCOCO1-214ENST00000549613 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
CALCOCO1-214ENST00000549613 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
CALCOCO1-214ENST00000549613 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
CALCOCO1-214ENST00000549613 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 GRM8O00222 908 aa17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 UTYO14607 1347 aa17.09■□□□□ 0.33
CALCOCO1-214ENST00000549613 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
CALCOCO1-214ENST00000549613 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
CALCOCO1-214ENST00000549613 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
CALCOCO1-214ENST00000549613 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
CALCOCO1-214ENST00000549613 TJP1Q07157 1748 aa17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 GCKRQ14397 625 aa17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 ZBTB47Q9UFB7 747 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-214ENST00000549613 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 ITPK1Q13572 414 aa17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 INTS5Q6P9B9 1019 aaKnown RBP17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 LRP5O75197 1615 aa17.06■□□□□ 0.32
CALCOCO1-214ENST00000549613 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 NUCB1Q02818 461 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 TRIM28Q13263 835 aaKnown RBP17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 ZBTB3Q9H5J0 574 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
CALCOCO1-214ENST00000549613 A0A087WZG4 1122 aa17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 RGS3P49796 1198 aa17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 ARXQ96QS3 562 aa17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
CALCOCO1-214ENST00000549613 BTAF1O14981 1849 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 MTX1Q13505 466 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 ISCA1Q9BUE6 129 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
CALCOCO1-214ENST00000549613 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.32
CALCOCO1-214ENST00000549613 H7C1W4 665 aa17.02■□□□□ 0.32
CALCOCO1-214ENST00000549613 PTF1AQ7RTS3 328 aa17.02■□□□□ 0.32
CALCOCO1-214ENST00000549613 PPP1R42Q7Z4L9 355 aa17.02■□□□□ 0.32
CALCOCO1-214ENST00000549613 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO1-214ENST00000549613 YY1P25490 414 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 POLA2Q14181 598 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 HSP90AB4PQ58FF6 505 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 COL15A1P39059 1388 aa17.01■□□□□ 0.31
CALCOCO1-214ENST00000549613 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
CALCOCO1-214ENST00000549613 SRGAP3O43295 1099 aa17■□□□□ 0.31
CALCOCO1-214ENST00000549613 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
CALCOCO1-214ENST00000549613 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
CALCOCO1-214ENST00000549613 RREB1Q92766 1687 aa17■□□□□ 0.31
CALCOCO1-214ENST00000549613 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 RGL2O15211 777 aa16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 TBC1D2BQ9UPU7 963 aa16.99■□□□□ 0.31
CALCOCO1-214ENST00000549613 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
CALCOCO1-214ENST00000549613 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
CALCOCO1-214ENST00000549613 COL5A3P25940 1745 aaPredicted RBP16.98■□□□□ 0.31
CALCOCO1-214ENST00000549613 SURF6O75683 361 aaKnown RBP16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 TRIM37O94972 964 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 CASP7P55210 303 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 HLFQ16534 295 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
CALCOCO1-214ENST00000549613 LY75O60449 1722 aa16.96■□□□□ 0.31
CALCOCO1-214ENST00000549613 PDE4AP27815 886 aa16.96■□□□□ 0.31
CALCOCO1-214ENST00000549613 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
CALCOCO1-214ENST00000549613 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
CALCOCO1-214ENST00000549613 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms